Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL669942.2-201ENST00000620352 697 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 MIR6839-201ENST00000620425 113 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 AL121594.5-201ENST00000631724 573 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 OR5AC4P-202ENST00000642086 985 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DOAP06340 SNX18P3-202ENST00000565670 1750 ntBASIC6.05□□□□□ -1.44
HLA-DOAP06340 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DOAP06340 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DOAP06340 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DOAP06340 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DOAP06340 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DOAP06340 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
HLA-DOAP06340 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DOAP06340 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DOAP06340 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DOAP06340 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DOAP06340 MSL3P1-202ENST00000440028 1468 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DOAP06340 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 Y_RNA.318-201ENST00000365131 97 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 SNORA48.4-201ENST00000391089 134 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DOAP06340 AL355615.1-201ENST00000406187 641 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DOAP06340 UBE2V1P1-201ENST00000430836 445 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 OR7E125P-201ENST00000443450 846 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 AL137845.2-201ENST00000444292 988 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 Z73417.1-201ENST00000447373 778 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 BUD31P2-201ENST00000449374 300 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DOAP06340 AC010350.1-201ENST00000504908 231 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 ASNSP4-201ENST00000511103 447 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 OR51A1P-201ENST00000511110 946 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 AC021193.1-201ENST00000511607 420 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 AC118465.1-201ENST00000513820 1271 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 RNA5SP43-201ENST00000516559 110 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 AP005432.2-201ENST00000608162 586 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 MIR6820-201ENST00000611508 62 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 AC004232.3-201ENST00000622977 525 ntBASIC6.04□□□□□ -1.44
HLA-DOAP06340 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DOAP06340 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DOAP06340 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DOAP06340 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DOAP06340 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 RN7SKP115-201ENST00000363177 317 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 RNU6-906P-201ENST00000384700 70 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 MIR513B-201ENST00000385136 84 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 AC009518.2-201ENST00000418056 731 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 AC010099.3-201ENST00000423896 409 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 BX119904.4-201ENST00000424402 301 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 RSL24D1P3-201ENST00000449255 495 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 RN7SL319P-201ENST00000480656 221 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 IMPA1P1-201ENST00000510718 842 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 AC021006.3-201ENST00000530771 192 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DOAP06340 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms