Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
APOEP02649 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
APOEP02649 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
APOEP02649 RN7SKP267-201ENST00000410381 285 ntBASIC4.92□□□□□ -1.62
APOEP02649 AC234781.4-201ENST00000419384 244 ntBASIC4.92□□□□□ -1.62
APOEP02649 AL645608.4-201ENST00000423619 154 ntBASIC4.92□□□□□ -1.62
APOEP02649 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.92□□□□□ -1.62
APOEP02649 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.92□□□□□ -1.62
APOEP02649 AC004938.1-201ENST00000438468 308 ntBASIC4.92□□□□□ -1.62
APOEP02649 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.92□□□□□ -1.62
APOEP02649 AC079168.2-201ENST00000453977 416 ntBASIC4.92□□□□□ -1.62
APOEP02649 RPL5P16-201ENST00000471467 790 ntBASIC4.92□□□□□ -1.62
APOEP02649 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.92□□□□□ -1.62
APOEP02649 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.92□□□□□ -1.62
APOEP02649 DYNLL1P4-201ENST00000549314 266 ntBASIC4.92□□□□□ -1.62
APOEP02649 AL110118.1-201ENST00000553543 400 ntBASIC4.92□□□□□ -1.62
APOEP02649 AC011270.1-201ENST00000558606 583 ntBASIC4.92□□□□□ -1.62
APOEP02649 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.92□□□□□ -1.62
APOEP02649 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.92□□□□□ -1.62
APOEP02649 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.92□□□□□ -1.62
APOEP02649 AC097505.1-201ENST00000610199 565 ntBASIC4.92□□□□□ -1.62
APOEP02649 AC020763.5-201ENST00000623298 430 ntBASIC4.92□□□□□ -1.62
APOEP02649 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.92□□□□□ -1.62
APOEP02649 AL592182.3-201ENST00000642132 3304 ntBASIC4.92□□□□□ -1.62
APOEP02649 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
APOEP02649 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
APOEP02649 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.92□□□□□ -1.62
APOEP02649 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.92□□□□□ -1.62
APOEP02649 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
APOEP02649 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
APOEP02649 AL672167.1-205ENST00000641112 3080 ntBASIC4.91□□□□□ -1.62
APOEP02649 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
APOEP02649 OR51C1P-202ENST00000641159 1444 ntBASIC4.91□□□□□ -1.62
APOEP02649 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.91□□□□□ -1.62
APOEP02649 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
APOEP02649 MAPK10-286ENST00000641208 8747 ntBASIC4.91□□□□□ -1.62
APOEP02649 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
APOEP02649 RNU1-83P-201ENST00000363426 164 ntBASIC4.91□□□□□ -1.62
APOEP02649 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
APOEP02649 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
APOEP02649 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
APOEP02649 RPL37P18-201ENST00000411602 243 ntBASIC4.91□□□□□ -1.62
APOEP02649 H2AFZP5-201ENST00000446960 382 ntBASIC4.91□□□□□ -1.62
APOEP02649 AC025164.1-201ENST00000496249 478 ntBASIC4.91□□□□□ -1.62
APOEP02649 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.91□□□□□ -1.62
APOEP02649 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
APOEP02649 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.91□□□□□ -1.62
APOEP02649 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.91□□□□□ -1.62
APOEP02649 AC073137.1-201ENST00000605636 634 ntBASIC4.91□□□□□ -1.62
APOEP02649 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
APOEP02649 AC093775.1-201ENST00000624154 1868 ntBASIC4.91□□□□□ -1.62
APOEP02649 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
APOEP02649 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.91□□□□□ -1.62
APOEP02649 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
APOEP02649 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
APOEP02649 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.91□□□□□ -1.62
APOEP02649 DDX18P3-201ENST00000404856 2007 ntBASIC4.9□□□□□ -1.62
APOEP02649 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
APOEP02649 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.9□□□□□ -1.62
APOEP02649 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.9□□□□□ -1.62
APOEP02649 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
APOEP02649 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
APOEP02649 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
APOEP02649 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
APOEP02649 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
APOEP02649 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
APOEP02649 AL590762.2-201ENST00000395798 571 ntBASIC4.9□□□□□ -1.63
APOEP02649 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.9□□□□□ -1.63
APOEP02649 GLUD1P9-201ENST00000420997 1173 ntBASIC4.9□□□□□ -1.63
APOEP02649 CYCSP11-201ENST00000436426 315 ntBASIC4.9□□□□□ -1.63
APOEP02649 RPS26P2-201ENST00000440331 348 ntBASIC4.9□□□□□ -1.63
APOEP02649 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.9□□□□□ -1.63
APOEP02649 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.9□□□□□ -1.63
APOEP02649 AC134698.5-201ENST00000519444 336 ntBASIC4.9□□□□□ -1.63
APOEP02649 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.9□□□□□ -1.63
APOEP02649 AC063949.1-201ENST00000552900 865 ntBASIC4.9□□□□□ -1.63
APOEP02649 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.9□□□□□ -1.63
APOEP02649 RN7SL652P-201ENST00000577769 300 ntBASIC4.9□□□□□ -1.63
APOEP02649 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.9□□□□□ -1.63
APOEP02649 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.9□□□□□ -1.63
APOEP02649 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.9□□□□□ -1.63
APOEP02649 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.9□□□□□ -1.63
APOEP02649 AC015804.1-201ENST00000622935 435 ntBASIC4.9□□□□□ -1.63
APOEP02649 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.9□□□□□ -1.63
APOEP02649 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
APOEP02649 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
APOEP02649 AL445487.1-201ENST00000415694 1580 ntBASIC4.9□□□□□ -1.63
APOEP02649 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
APOEP02649 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
APOEP02649 UGT2B26P-201ENST00000508672 1613 ntBASIC4.9□□□□□ -1.63
APOEP02649 AC010300.1-201ENST00000600671 5134 ntBASIC4.9□□□□□ -1.63
APOEP02649 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.89□□□□□ -1.63
APOEP02649 AC010928.1-201ENST00000592477 1447 ntBASIC4.89□□□□□ -1.63
APOEP02649 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
APOEP02649 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
APOEP02649 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.89□□□□□ -1.63
APOEP02649 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.89□□□□□ -1.63
APOEP02649 Z98745.1-201ENST00000402553 494 ntBASIC4.89□□□□□ -1.63
APOEP02649 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.89□□□□□ -1.63
APOEP02649 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms