Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SPTA1P02549 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SPTA1P02549 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SPTA1P02549 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SPTA1P02549 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SPTA1P02549 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.26□□□□□ -1.73
SPTA1P02549 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.26□□□□□ -1.73
SPTA1P02549 SPRR2C-201ENST00000290702 219 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 AL022722.2-201ENST00000402519 180 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 OR51B3P-201ENST00000412287 913 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.26□□□□□ -1.73
SPTA1P02549 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.26□□□□□ -1.73
SPTA1P02549 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.26□□□□□ -1.73
SPTA1P02549 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.26□□□□□ -1.73
SPTA1P02549 AC019176.2-201ENST00000611579 315 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.26□□□□□ -1.73
SPTA1P02549 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.26□□□□□ -1.73
SPTA1P02549 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SPTA1P02549 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SPTA1P02549 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SPTA1P02549 AC009951.1-201ENST00000623674 2614 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SPTA1P02549 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SPTA1P02549 MIR7-3-201ENST00000384898 110 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 SDHCP2-201ENST00000398565 501 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.25□□□□□ -1.73
SPTA1P02549 AC011933.1-201ENST00000413334 321 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.25□□□□□ -1.73
SPTA1P02549 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SPTA1P02549 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.25□□□□□ -1.73
SPTA1P02549 AC116533.1-201ENST00000459748 321 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.25□□□□□ -1.73
SPTA1P02549 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.25□□□□□ -1.73
SPTA1P02549 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.25□□□□□ -1.73
SPTA1P02549 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.25□□□□□ -1.73
SPTA1P02549 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.25□□□□□ -1.73
SPTA1P02549 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.25□□□□□ -1.73
SPTA1P02549 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SPTA1P02549 MAPK10-286ENST00000641208 8747 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SPTA1P02549 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.25□□□□□ -1.73
SPTA1P02549 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
SPTA1P02549 AC005261.2-201ENST00000593427 4258 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.25□□□□□ -1.73
SPTA1P02549 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SPTA1P02549 PTMAP5-201ENST00000393073 333 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 AL590704.1-201ENST00000402856 794 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.25□□□□□ -1.73
SPTA1P02549 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.25□□□□□ -1.73
SPTA1P02549 AL356387.2-201ENST00000422272 243 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.25□□□□□ -1.73
SPTA1P02549 NFYAP1-201ENST00000431953 972 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.25□□□□□ -1.73
SPTA1P02549 AL359265.1-201ENST00000440296 795 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 RPL7P33-201ENST00000444159 742 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 OR8Q1P-201ENST00000526467 655 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.25□□□□□ -1.73
SPTA1P02549 AC116312.1-201ENST00000606841 314 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 AC005899.7-201ENST00000618199 588 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 OR14L1P-202ENST00000641545 3009 ntBASIC4.25□□□□□ -1.73
SPTA1P02549 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SPTA1P02549 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.25□□□□□ -1.73
SPTA1P02549 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SPTA1P02549 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SPTA1P02549 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SPTA1P02549 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SPTA1P02549 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.25□□□□□ -1.73
SPTA1P02549 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.25□□□□□ -1.73
SPTA1P02549 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SPTA1P02549 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SPTA1P02549 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SPTA1P02549 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SPTA1P02549 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SPTA1P02549 AC087190.4-201ENST00000574616 8334 ntBASIC4.24□□□□□ -1.73
SPTA1P02549 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SPTA1P02549 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.24□□□□□ -1.73
SPTA1P02549 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.24□□□□□ -1.73
SPTA1P02549 LINC00993-201ENST00000420453 540 ntBASIC4.24□□□□□ -1.73
SPTA1P02549 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC4.24□□□□□ -1.73
SPTA1P02549 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.24□□□□□ -1.73
SPTA1P02549 GAPDHP14-201ENST00000450472 937 ntBASIC4.24□□□□□ -1.73
SPTA1P02549 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.24□□□□□ -1.73
SPTA1P02549 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.24□□□□□ -1.73
SPTA1P02549 AC079777.1-201ENST00000623836 1953 ntBASIC4.24□□□□□ -1.73
SPTA1P02549 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SPTA1P02549 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.24□□□□□ -1.73
SPTA1P02549 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.24□□□□□ -1.73
SPTA1P02549 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.24□□□□□ -1.73
SPTA1P02549 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.24□□□□□ -1.73
SPTA1P02549 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SPTA1P02549 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SPTA1P02549 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SPTA1P02549 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SPTA1P02549 AC018644.1-201ENST00000429934 551 ntBASIC4.24□□□□□ -1.73
SPTA1P02549 CYCSP32-201ENST00000440548 321 ntBASIC4.24□□□□□ -1.73
SPTA1P02549 BX842559.2-201ENST00000451418 605 ntBASIC4.24□□□□□ -1.73
SPTA1P02549 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.24□□□□□ -1.73
SPTA1P02549 IMPA1P1-201ENST00000510718 842 ntBASIC4.24□□□□□ -1.73
SPTA1P02549 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.24□□□□□ -1.73
SPTA1P02549 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms