Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UPK1BO75841 RN7SKP56-201ENST00000410513 331 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 BMS1P17-202ENST00000416720 316 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1BO75841 TNPO1P1-201ENST00000423641 1138 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1BO75841 MTND4LP13-201ENST00000425022 298 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AC092646.1-201ENST00000427142 901 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AL121578.1-201ENST00000428051 892 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 FAM96AP1-201ENST00000430879 482 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1BO75841 MTND2P2-201ENST00000434633 945 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AL022324.2-201ENST00000434827 780 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1BO75841 PSMD10P3-201ENST00000437000 448 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.97□□□□□ -1.77
UPK1BO75841 AF228730.2-201ENST00000438784 848 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1BO75841 RAB28P3-201ENST00000448325 597 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AC022431.1-201ENST00000450941 438 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AC243772.1-201ENST00000451620 410 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 RPL36AP55-201ENST00000454114 305 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AC069277.2-201ENST00000454211 432 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.97□□□□□ -1.77
UPK1BO75841 AC015864.1-201ENST00000496512 544 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1BO75841 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UPK1BO75841 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1BO75841 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1BO75841 OR4A41P-201ENST00000533053 928 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC3.97□□□□□ -1.77
UPK1BO75841 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.97□□□□□ -1.77
UPK1BO75841 AL591222.2-201ENST00000604443 754 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AC012213.4-201ENST00000606457 354 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AL512413.1-201ENST00000606489 382 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AC129778.1-202ENST00000623812 261 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AL353662.3-201ENST00000625131 237 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AL591379.1-207ENST00000635982 261 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 AMYH02020865.1-205ENST00000636189 261 ntBASIC3.97□□□□□ -1.77
UPK1BO75841 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.97□□□□□ -1.77
UPK1BO75841 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UPK1BO75841 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
UPK1BO75841 ZFRP1-201ENST00000457579 2970 ntBASIC3.96□□□□□ -1.77
UPK1BO75841 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.96□□□□□ -1.77
UPK1BO75841 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
UPK1BO75841 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC3.96□□□□□ -1.78
UPK1BO75841 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UPK1BO75841 AC010132.2-201ENST00000295493 1043 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 SNORA74A-201ENST00000364089 198 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
UPK1BO75841 GLULP6-201ENST00000399502 913 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UPK1BO75841 AL590609.2-201ENST00000421430 368 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.96□□□□□ -1.78
UPK1BO75841 AC093084.1-201ENST00000424233 687 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.96□□□□□ -1.78
UPK1BO75841 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UPK1BO75841 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.96□□□□□ -1.78
UPK1BO75841 CASP3P1-201ENST00000446037 609 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 KNOP1P3-201ENST00000446933 426 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 AC239809.1-201ENST00000450470 217 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UPK1BO75841 AC004890.1-201ENST00000461005 181 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UPK1BO75841 RN7SL585P-201ENST00000470538 280 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 RN7SL808P-201ENST00000496066 299 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.96□□□□□ -1.78
UPK1BO75841 AC138866.2-201ENST00000508650 584 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 AC018797.1-201ENST00000510791 255 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.96□□□□□ -1.78
UPK1BO75841 PHBP17-201ENST00000528576 541 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.96□□□□□ -1.78
UPK1BO75841 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.96□□□□□ -1.78
UPK1BO75841 PDCD5P1-201ENST00000543528 309 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.96□□□□□ -1.78
UPK1BO75841 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.96□□□□□ -1.78
UPK1BO75841 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.96□□□□□ -1.78
UPK1BO75841 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.96□□□□□ -1.78
UPK1BO75841 AP005901.4-201ENST00000577336 569 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.96□□□□□ -1.78
UPK1BO75841 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.96□□□□□ -1.78
UPK1BO75841 AC069307.1-201ENST00000602820 447 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC3.96□□□□□ -1.78
UPK1BO75841 uc_338.29-201ENST00000615099 168 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.96□□□□□ -1.78
UPK1BO75841 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.96□□□□□ -1.78
UPK1BO75841 AC008785.1-201ENST00000624475 456 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.96□□□□□ -1.78
UPK1BO75841 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UPK1BO75841 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
UPK1BO75841 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.96□□□□□ -1.78
UPK1BO75841 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UPK1BO75841 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UPK1BO75841 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
UPK1BO75841 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
UPK1BO75841 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UPK1BO75841 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.95□□□□□ -1.78
UPK1BO75841 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
UPK1BO75841 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UPK1BO75841 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms