Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.63□□□□□ -1.83
SSSCA1O60232 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.63□□□□□ -1.83
SSSCA1O60232 UBTFL9-201ENST00000534504 1148 ntBASIC3.63□□□□□ -1.83
SSSCA1O60232 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.63□□□□□ -1.83
SSSCA1O60232 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.63□□□□□ -1.83
SSSCA1O60232 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.63□□□□□ -1.83
SSSCA1O60232 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.63□□□□□ -1.83
SSSCA1O60232 AC004825.1-201ENST00000555068 586 ntBASIC3.63□□□□□ -1.83
SSSCA1O60232 RN7SL652P-201ENST00000577769 300 ntBASIC3.63□□□□□ -1.83
SSSCA1O60232 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.63□□□□□ -1.83
SSSCA1O60232 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.63□□□□□ -1.83
SSSCA1O60232 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSSCA1O60232 AC131238.1-201ENST00000617135 328 ntBASIC3.63□□□□□ -1.83
SSSCA1O60232 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.63□□□□□ -1.83
SSSCA1O60232 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.63□□□□□ -1.83
SSSCA1O60232 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.63□□□□□ -1.83
SSSCA1O60232 SNORA17.5-201ENST00000630429 132 ntBASIC3.63□□□□□ -1.83
SSSCA1O60232 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.63□□□□□ -1.83
SSSCA1O60232 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.63□□□□□ -1.83
SSSCA1O60232 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
SSSCA1O60232 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSSCA1O60232 AC108467.2-201ENST00000617640 1597 ntBASIC3.63□□□□□ -1.83
SSSCA1O60232 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SSSCA1O60232 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SSSCA1O60232 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSSCA1O60232 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.62□□□□□ -1.83
SSSCA1O60232 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSSCA1O60232 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSSCA1O60232 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSSCA1O60232 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.62□□□□□ -1.83
SSSCA1O60232 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSSCA1O60232 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SSSCA1O60232 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSSCA1O60232 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SSSCA1O60232 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SSSCA1O60232 MIR143-201ENST00000385300 106 ntBASIC3.62□□□□□ -1.83
SSSCA1O60232 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.62□□□□□ -1.83
SSSCA1O60232 TRIM60P17-201ENST00000415181 719 ntBASIC3.62□□□□□ -1.83
SSSCA1O60232 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.62□□□□□ -1.83
SSSCA1O60232 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.62□□□□□ -1.83
SSSCA1O60232 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.62□□□□□ -1.83
SSSCA1O60232 AC112498.1-201ENST00000444401 332 ntBASIC3.62□□□□□ -1.83
SSSCA1O60232 AC108463.1-201ENST00000450258 347 ntBASIC3.62□□□□□ -1.83
SSSCA1O60232 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.62□□□□□ -1.83
SSSCA1O60232 RN7SL172P-201ENST00000460535 303 ntBASIC3.62□□□□□ -1.83
SSSCA1O60232 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.62□□□□□ -1.83
SSSCA1O60232 HMGB3P13-201ENST00000511263 607 ntBASIC3.62□□□□□ -1.83
SSSCA1O60232 HNRNPKP5-201ENST00000515300 253 ntBASIC3.62□□□□□ -1.83
SSSCA1O60232 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.62□□□□□ -1.83
SSSCA1O60232 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.62□□□□□ -1.83
SSSCA1O60232 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC3.62□□□□□ -1.83
SSSCA1O60232 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.62□□□□□ -1.83
SSSCA1O60232 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.62□□□□□ -1.83
SSSCA1O60232 OR1AB1P-201ENST00000585564 761 ntBASIC3.62□□□□□ -1.83
SSSCA1O60232 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.62□□□□□ -1.83
SSSCA1O60232 BPIFA4P-203ENST00000603168 689 ntBASIC3.62□□□□□ -1.83
SSSCA1O60232 AL158196.1-201ENST00000616786 434 ntBASIC3.62□□□□□ -1.83
SSSCA1O60232 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC3.62□□□□□ -1.83
SSSCA1O60232 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.62□□□□□ -1.83
SSSCA1O60232 AL592182.3-201ENST00000642132 3304 ntBASIC3.62□□□□□ -1.83
SSSCA1O60232 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SSSCA1O60232 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSSCA1O60232 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSSCA1O60232 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSSCA1O60232 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.62□□□□□ -1.83
SSSCA1O60232 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.62□□□□□ -1.83
SSSCA1O60232 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSSCA1O60232 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSSCA1O60232 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.61□□□□□ -1.83
SSSCA1O60232 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.61□□□□□ -1.83
SSSCA1O60232 AC105074.1-201ENST00000623380 3095 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.61□□□□□ -1.83
SSSCA1O60232 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
SSSCA1O60232 MIR323A-201ENST00000362199 86 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 SNORA71.2-201ENST00000364941 134 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.61□□□□□ -1.83
SSSCA1O60232 SNORA74C-2-201ENST00000411179 201 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 AC140479.3-201ENST00000418944 1126 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 RAD23BP1-201ENST00000421404 1227 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 RPS12P10-201ENST00000427031 377 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 AL451050.1-201ENST00000450126 415 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.61□□□□□ -1.83
SSSCA1O60232 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.61□□□□□ -1.83
SSSCA1O60232 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSSCA1O60232 RN7SKP70-201ENST00000516655 271 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 IGHV3-63-201ENST00000518422 341 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.61□□□□□ -1.83
SSSCA1O60232 PHBP17-201ENST00000528576 541 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.61□□□□□ -1.83
SSSCA1O60232 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.61□□□□□ -1.83
SSSCA1O60232 MIR5010-201ENST00000582846 120 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.61□□□□□ -1.83
SSSCA1O60232 BNIP3P32-201ENST00000600015 554 ntBASIC3.61□□□□□ -1.83
SSSCA1O60232 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.61□□□□□ -1.83
SSSCA1O60232 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.61□□□□□ -1.83
SSSCA1O60232 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.61□□□□□ -1.83
SSSCA1O60232 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSSCA1O60232 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
SSSCA1O60232 ZNF962P-201ENST00000443465 3140 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms