Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ENPP7P9-201ENST00000514456 627 ntBASIC5.19□□□□□ -1.58
O00370 SEC11B-201ENST00000518383 499 ntBASIC5.19□□□□□ -1.58
O00370 MORF4L1P3-201ENST00000525966 950 ntBASIC5.19□□□□□ -1.58
O00370 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.19□□□□□ -1.58
O00370 AP000676.2-201ENST00000529711 301 ntBASIC5.19□□□□□ -1.58
O00370 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.19□□□□□ -1.58
O00370 AC011487.3-201ENST00000593607 453 ntBASIC5.19□□□□□ -1.58
O00370 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.19□□□□□ -1.58
O00370 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.19□□□□□ -1.58
O00370 AC020910.3-201ENST00000603701 874 ntBASIC5.19□□□□□ -1.58
O00370 AC010424.2-201ENST00000607594 443 ntBASIC5.19□□□□□ -1.58
O00370 AC021106.3-201ENST00000623925 531 ntBASIC5.19□□□□□ -1.58
O00370 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
O00370 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
O00370 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
O00370 IRF5P1-201ENST00000504852 2164 ntBASIC5.19□□□□□ -1.58
O00370 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
O00370 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.18□□□□□ -1.58
O00370 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.18□□□□□ -1.58
O00370 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
O00370 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
O00370 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
O00370 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
O00370 SNORA58B-201ENST00000364259 136 ntBASIC5.18□□□□□ -1.58
O00370 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
O00370 AL589655.1-201ENST00000405398 482 ntBASIC5.18□□□□□ -1.58
O00370 AC019070.1-201ENST00000415008 1024 ntBASIC5.18□□□□□ -1.58
O00370 TMBIM7P-201ENST00000418074 855 ntBASIC5.18□□□□□ -1.58
O00370 RPS26P13-201ENST00000419030 330 ntBASIC5.18□□□□□ -1.58
O00370 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.18□□□□□ -1.58
O00370 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.18□□□□□ -1.58
O00370 RPS26P4-201ENST00000431743 355 ntBASIC5.18□□□□□ -1.58
O00370 VN1R54P-201ENST00000435210 1049 ntBASIC5.18□□□□□ -1.58
O00370 AP000936.3-201ENST00000438127 255 ntBASIC5.18□□□□□ -1.58
O00370 PRPF38AP2-201ENST00000438179 851 ntBASIC5.18□□□□□ -1.58
O00370 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.18□□□□□ -1.58
O00370 SUMO2P1-206ENST00000445436 284 ntBASIC5.18□□□□□ -1.58
O00370 RPL10P17-201ENST00000453852 316 ntBASIC5.18□□□□□ -1.58
O00370 AC022795.1-201ENST00000473808 480 ntBASIC5.18□□□□□ -1.58
O00370 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.18□□□□□ -1.58
O00370 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
O00370 AC008410.1-201ENST00000483777 339 ntBASIC5.18□□□□□ -1.58
O00370 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
O00370 GAPDHP56-201ENST00000506031 988 ntBASIC5.18□□□□□ -1.58
O00370 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
O00370 Y_RNA.719-201ENST00000517156 106 ntBASIC5.18□□□□□ -1.58
O00370 OR4V1P-201ENST00000525394 1140 ntBASIC5.18□□□□□ -1.58
O00370 AC021006.3-201ENST00000530771 192 ntBASIC5.18□□□□□ -1.58
O00370 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.18□□□□□ -1.58
O00370 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.18□□□□□ -1.58
O00370 OR1F2P-201ENST00000570470 933 ntBASIC5.18□□□□□ -1.58
O00370 AC027281.1-201ENST00000574178 758 ntBASIC5.18□□□□□ -1.58
O00370 MIR3908-201ENST00000579798 126 ntBASIC5.18□□□□□ -1.58
O00370 SNX6P1-201ENST00000601728 1224 ntBASIC5.18□□□□□ -1.58
O00370 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.18□□□□□ -1.58
O00370 AP002967.1-201ENST00000624203 539 ntBASIC5.18□□□□□ -1.58
O00370 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.18□□□□□ -1.58
O00370 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.18□□□□□ -1.58
O00370 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
O00370 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
O00370 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.18□□□□□ -1.58
O00370 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.18□□□□□ -1.58
O00370 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
O00370 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
O00370 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
O00370 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
O00370 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
O00370 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
O00370 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
O00370 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.17□□□□□ -1.58
O00370 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.17□□□□□ -1.58
O00370 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
O00370 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
O00370 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.17□□□□□ -1.58
O00370 AL672167.1-205ENST00000641112 3080 ntBASIC5.17□□□□□ -1.58
O00370 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
O00370 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.17□□□□□ -1.58
O00370 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
O00370 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
O00370 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
O00370 COX6B1P1-201ENST00000415962 213 ntBASIC5.17□□□□□ -1.58
O00370 AL590623.1-201ENST00000427864 105 ntBASIC5.17□□□□□ -1.58
O00370 AC092162.1-201ENST00000432828 434 ntBASIC5.17□□□□□ -1.58
O00370 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.17□□□□□ -1.58
O00370 HIGD1AP8-201ENST00000453927 274 ntBASIC5.17□□□□□ -1.58
O00370 AC025181.1-201ENST00000477507 416 ntBASIC5.17□□□□□ -1.58
O00370 RN7SL826P-201ENST00000479724 288 ntBASIC5.17□□□□□ -1.58
O00370 AK4P6-201ENST00000505168 528 ntBASIC5.17□□□□□ -1.58
O00370 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.17□□□□□ -1.58
O00370 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.17□□□□□ -1.58
O00370 RFPL4AP5-201ENST00000514977 504 ntBASIC5.17□□□□□ -1.58
O00370 RNA5SP249-201ENST00000516127 99 ntBASIC5.17□□□□□ -1.58
O00370 snoU109.6-201ENST00000516831 118 ntBASIC5.17□□□□□ -1.58
O00370 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.17□□□□□ -1.58
O00370 AL049839.1-201ENST00000556151 657 ntBASIC5.17□□□□□ -1.58
O00370 AL390334.1-201ENST00000556395 450 ntBASIC5.17□□□□□ -1.58
O00370 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.17□□□□□ -1.58
O00370 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.17□□□□□ -1.58
O00370 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
O00370 CR381572.2-201ENST00000624852 397 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 250.9 ms