Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL450996.1-201ENST00000445574 1202 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AL591363.1-201ENST00000450091 483 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 OTX2P1-201ENST00000450956 354 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AC015724.1-201ENST00000478577 156 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 RPL23AP44-201ENST00000482216 473 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 MTATP6P24-201ENST00000576835 677 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 MIR5708-201ENST00000579723 85 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AC140725.3-201ENST00000616193 880 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AC234782.5-201ENST00000617723 324 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 CASC19-204ENST00000641001 2055 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AC000367.1-201ENST00000452711 1766 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 SAMMSON-213ENST00000641336 1521 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 RNA5SP132-201ENST00000364725 118 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 OR1L1-202ENST00000373686 1083 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 RNU6-636P-201ENST00000384598 107 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 OR3A2-201ENST00000408891 1076 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AC096921.1-201ENST00000411661 375 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 RPS6P23-201ENST00000413224 722 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 CNOT7P1-201ENST00000429006 852 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 ELOCP13-201ENST00000443934 329 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 RPS23P9-201ENST00000448848 438 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 GAPDHP39-201ENST00000481866 979 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 RPS3AP6-201ENST00000484430 795 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AC005412.2-201ENST00000492004 341 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 GLUD1P3-202ENST00000508551 200 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 EIF3KP3-201ENST00000514461 639 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 RNA5SP228-201ENST00000516232 133 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AC020937.1-201ENST00000519677 1013 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 NRBF2P4-201ENST00000520874 850 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 MIR4311-201ENST00000580794 100 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AL445423.1-201ENST00000609941 536 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AC022467.1-201ENST00000614738 749 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AC097520.1-201ENST00000624435 385 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AP001153.1-201ENST00000641024 338 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AC005261.4-201ENST00000600047 1385 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AC087516.1-201ENST00000561236 2428 ntBASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
COL4A3BPQ9Y5P4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.26□□□□□ -1.41
COL4A3BPQ9Y5P4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A3BPQ9Y5P4 AL121886.1-201ENST00000358609 435 ntBASIC6.26□□□□□ -1.41
COL4A3BPQ9Y5P4 RN7SKP124-201ENST00000364730 341 ntBASIC6.26□□□□□ -1.41
COL4A3BPQ9Y5P4 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.26□□□□□ -1.41
COL4A3BPQ9Y5P4 Y_RNA.472-201ENST00000384322 102 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms