Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MTCO2P31-201ENST00000402702 684 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 U3.36-201ENST00000408418 213 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AL158825.1-201ENST00000414735 521 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AC008173.1-201ENST00000418901 264 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 HSPE1P16-201ENST00000426640 348 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 CBX1P2-201ENST00000453841 458 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AC010374.1-201ENST00000503762 1237 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 NDUFB5P1-201ENST00000508134 564 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AP000859.1-201ENST00000525536 307 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AC137627.1-201ENST00000545761 289 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AC006116.3-201ENST00000592968 361 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AC009948.4-201ENST00000604692 675 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AC090527.3-201ENST00000619041 548 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AP001029.2-203ENST00000589795 4910 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AC093591.2-201ENST00000565254 3843 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RNA5SP443-201ENST00000363083 132 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RPL5P19-201ENST00000404228 893 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RNU2-17P-201ENST00000410290 190 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AL034379.1-201ENST00000423216 253 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RIMKLBP2-201ENST00000424737 654 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 DEFB130D-201ENST00000426866 237 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RPS27P5-201ENST00000444247 244 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RPL12P39-201ENST00000455456 496 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RPL7P6-201ENST00000480903 738 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RN7SL808P-201ENST00000496066 299 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AC112673.1-201ENST00000513168 575 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RFPL4AP3-201ENST00000515267 345 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RN7SKP66-201ENST00000516681 231 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AP000916.1-201ENST00000533869 835 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 MIR3691-201ENST00000578066 90 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AC024940.4-201ENST00000605507 246 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AL365400.2-201ENST00000605604 902 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RNU4-5P-201ENST00000607255 135 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AL451049.1-201ENST00000608672 497 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AC245100.7-201ENST00000609678 442 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AL049539.1-201ENST00000611964 459 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 MIR6798-201ENST00000612887 67 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AC090510.2-201ENST00000617465 629 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 MTCO1P15-201ENST00000529569 1526 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 AC008079.2-201ENST00000623543 20396 ntBASIC5.79□□□□□ -1.48
SSX2IPQ9Y2D8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 OR55B1P-203ENST00000641518 2602 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms