Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 TAS2R15P-201ENST00000390674 928 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AL603865.2-201ENST00000401679 213 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AL133482.1-201ENST00000415988 498 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 MTCO2P21-201ENST00000419780 677 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 H2AFZP6-201ENST00000444403 394 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 SEPT14P24-201ENST00000447236 180 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 OTX2P1-201ENST00000450956 354 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 RN7SL860P-201ENST00000473738 223 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 CDH12P2-201ENST00000504393 298 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 RNU6-513P-201ENST00000516104 104 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 PMS2P3-207ENST00000529061 717 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 OR4A43P-201ENST00000532938 908 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC122688.1-201ENST00000541494 223 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 SNORD39.2-201ENST00000579995 76 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AP005262.1-201ENST00000582646 997 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC018618.2-201ENST00000604770 446 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC097478.2-201ENST00000610572 514 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC005840.5-201ENST00000619166 599 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AC011330.2-201ENST00000621680 635 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AP002791.1-201ENST00000623291 381 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 AL078621.3-201ENST00000623707 2042 ntBASIC5.35□□□□□ -1.55
VPS4AQ9UN37 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4AQ9UN37 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AC104260.2-201ENST00000623551 3497 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 MTND4P8-201ENST00000514997 1362 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 RNA5SP500-201ENST00000364486 119 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 MTND4P13-201ENST00000402078 1023 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 RN7SKP125-201ENST00000410481 302 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 MRPL53P1-201ENST00000414323 319 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 RPL22P18-201ENST00000417197 377 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 KRR1P1-201ENST00000419430 803 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AC092017.2-201ENST00000427600 362 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AL022331.1-201ENST00000429025 477 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AC012075.1-201ENST00000436549 580 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 RPL12P3-201ENST00000440080 396 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AC004022.1-201ENST00000447766 1066 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 RN7SL172P-201ENST00000460535 303 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 RN7SL188P-201ENST00000469842 285 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AC004453.1-201ENST00000487895 408 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 RPL15P21-201ENST00000495592 567 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 RPL21P131-201ENST00000497298 483 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 HMGB1P42-201ENST00000532126 553 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AC087897.1-201ENST00000550134 156 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 MIR4660-201ENST00000583549 74 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AC002487.1-201ENST00000604565 994 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AL139124.1-201ENST00000609123 421 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 Mico1.1-201ENST00000611698 204 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 FRG1HP-204ENST00000617940 757 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AP004607.9-201ENST00000618202 316 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms