Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC074276.2-201ENST00000619891 348 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 AC087565.3-202ENST00000642085 1603 ntBASIC4.67□□□□□ -1.66
NDE1Q9NXR1 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NDE1Q9NXR1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AL121950.1-201ENST00000624993 2077 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 RNA5SP435-201ENST00000364044 108 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 RN7SKP114-201ENST00000410327 279 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 RAB9AP4-201ENST00000415230 609 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 OR2AM1P-201ENST00000422137 422 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 NPM1P26-201ENST00000426339 738 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AC115283.1-201ENST00000427353 400 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 MTND4LP14-201ENST00000429447 288 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AC110602.1-201ENST00000437414 318 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 HMGB3P9-201ENST00000441799 583 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 RBMY2TP-201ENST00000451162 947 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 RPL5P30-201ENST00000465511 891 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AC012158.1-204ENST00000483430 465 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 RNU6-709P-201ENST00000517257 104 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 OR7E10P-201ENST00000526420 991 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AC005363.1-201ENST00000530779 351 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 OR4R2P-201ENST00000530815 597 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 MTND6P33-201ENST00000571794 183 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AC130352.1-201ENST00000602979 661 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.66□□□□□ -1.66
NDE1Q9NXR1 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NDE1Q9NXR1 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NDE1Q9NXR1 Z98755.1-201ENST00000407015 1384 ntBASIC4.65□□□□□ -1.66
NDE1Q9NXR1 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.65□□□□□ -1.66
NDE1Q9NXR1 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
NDE1Q9NXR1 AC008758.3-201ENST00000507003 1829 ntBASIC4.65□□□□□ -1.66
NDE1Q9NXR1 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.65□□□□□ -1.66
NDE1Q9NXR1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
NDE1Q9NXR1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.65□□□□□ -1.66
NDE1Q9NXR1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.65□□□□□ -1.66
NDE1Q9NXR1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NDE1Q9NXR1 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NDE1Q9NXR1 OR56B2P-201ENST00000317102 954 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 MIR448-201ENST00000362131 111 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 RNU4-39P-201ENST00000362455 127 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 MIR421-201ENST00000365696 85 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 CCNB2P1-201ENST00000399411 1150 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 OR7E156P-201ENST00000400303 464 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 LAP3P1-201ENST00000403648 294 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AL160275.2-201ENST00000412010 394 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC108075.1-201ENST00000424692 529 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 SDR42E1P3-201ENST00000438345 502 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AL390119.1-201ENST00000440329 312 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 OR7E125P-201ENST00000443450 846 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC144530.1-201ENST00000452862 555 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms