Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 LINC01808-202ENST00000641680 1116 ntBASIC5.41□□□□□ -1.54
PARPBPQ9NWS1 CASC19-264ENST00000641912 1184 ntBASIC5.41□□□□□ -1.54
PARPBPQ9NWS1 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
PARPBPQ9NWS1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.41□□□□□ -1.54
PARPBPQ9NWS1 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PARPBPQ9NWS1 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PARPBPQ9NWS1 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PARPBPQ9NWS1 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PARPBPQ9NWS1 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PARPBPQ9NWS1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PARPBPQ9NWS1 NEPNP-201ENST00000404786 1371 ntBASIC5.41□□□□□ -1.54
PARPBPQ9NWS1 HSPD1P7-201ENST00000447985 1686 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC000367.1-201ENST00000452711 1766 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 LINC02019-201ENST00000608605 2060 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 COX6B1P3-201ENST00000312310 260 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 IL6STP1-201ENST00000346911 1020 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 CHMP1B2P-201ENST00000399581 597 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AL079342.2-201ENST00000403367 482 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 RPS26P38-201ENST00000414476 348 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 IPPKP1-201ENST00000422501 768 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC069154.1-201ENST00000432914 542 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC007679.3-201ENST00000434035 414 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AL353662.1-201ENST00000439099 327 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 FTLP8-201ENST00000446770 267 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 TPMTP4-201ENST00000450749 678 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 SUMO2P2-201ENST00000456482 255 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 CFTRP1-201ENST00000456646 183 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC068228.1-201ENST00000461723 211 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC023194.2-201ENST00000465398 406 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC107398.1-201ENST00000486904 505 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 RN7SL170P-201ENST00000487098 295 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC138853.1-201ENST00000503549 823 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 RPL37P25-201ENST00000507308 276 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 RNA5SP473-201ENST00000516402 125 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 Vault.2-201ENST00000516519 98 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AP001317.1-201ENST00000531194 960 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AP000619.3-201ENST00000535634 1127 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 MTCO1P40-201ENST00000574371 625 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AC100767.2-201ENST00000604840 693 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 MIR4278-201ENST00000636094 69 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 AF001550.2-201ENST00000636643 217 ntBASIC5.4□□□□□ -1.54
PARPBPQ9NWS1 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
PARPBPQ9NWS1 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
PARPBPQ9NWS1 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
PARPBPQ9NWS1 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
PARPBPQ9NWS1 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PARPBPQ9NWS1 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.4□□□□□ -1.55
PARPBPQ9NWS1 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.4□□□□□ -1.55
PARPBPQ9NWS1 AC132825.1-201ENST00000463573 2247 ntBASIC5.4□□□□□ -1.55
PARPBPQ9NWS1 RBMY1HP-201ENST00000382759 1389 ntBASIC5.4□□□□□ -1.55
PARPBPQ9NWS1 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.4□□□□□ -1.55
PARPBPQ9NWS1 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.4□□□□□ -1.55
PARPBPQ9NWS1 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.4□□□□□ -1.55
PARPBPQ9NWS1 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PARPBPQ9NWS1 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PARPBPQ9NWS1 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.39□□□□□ -1.55
PARPBPQ9NWS1 AC007342.5-201ENST00000571340 2142 ntBASIC5.39□□□□□ -1.55
PARPBPQ9NWS1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PARPBPQ9NWS1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PARPBPQ9NWS1 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PARPBPQ9NWS1 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PARPBPQ9NWS1 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms