Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PA2G4P6-201ENST00000438325 1197 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 RPL7P61-201ENST00000451721 751 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 ISCUP1-201ENST00000454451 448 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 RPS3AP53-201ENST00000454716 778 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 SCARNA10-201ENST00000459255 330 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 ATP5G1P3-201ENST00000463301 410 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 KATNBL1P4-201ENST00000503545 918 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 AC098799.3-201ENST00000506095 438 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 RNU6-943P-201ENST00000516960 98 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 AC023762.1-201ENST00000603280 584 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 MIR6853-201ENST00000619642 74 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 AL391684.1-202ENST00000641293 1636 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 AC108751.5-201ENST00000492880 1336 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 CR383656.5-201ENST00000547616 1340 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 SDAD1P1-202ENST00000524156 2051 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 AC125257.1-201ENST00000560400 2930 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 EOGT-210ENST00000615922 1931 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 RNA5SP151-201ENST00000365632 117 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 VDAC1P9-201ENST00000412766 841 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 ATG4AP1-201ENST00000416893 538 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 MTND6P18-201ENST00000439477 513 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AL935212.3-201ENST00000450729 284 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 RPS6P2-201ENST00000454208 705 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 RPL21P6-201ENST00000479171 504 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 RN7SL809P-201ENST00000482040 297 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 DEFB109F-201ENST00000491870 277 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AP001922.4-201ENST00000526967 290 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AP001804.2-201ENST00000533932 910 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 UBE2FP2-201ENST00000566646 462 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AC016180.1-201ENST00000567945 403 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 RPL7P50-201ENST00000600588 727 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AC098935.2-201ENST00000604222 466 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AL161912.3-201ENST00000605404 628 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AC067838.1-201ENST00000606064 577 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 AC131971.1-201ENST00000332881 1482 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TREX1Q9NSU2 DDX18P3-201ENST00000404856 2007 ntBASIC4.62□□□□□ -1.67
TREX1Q9NSU2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 RNA5SP87-201ENST00000384155 118 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 MIR195-201ENST00000385194 87 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 RN7SKP97-201ENST00000410966 333 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AL590609.2-201ENST00000421430 368 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AC104837.2-201ENST00000427236 424 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 HMGB3P9-201ENST00000441799 583 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 RPL36AP15-201ENST00000444514 266 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 VN1R96P-201ENST00000446052 858 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AC091685.2-201ENST00000454924 864 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms