Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 RPS6P2-201ENST00000454208 705 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC104849.1-201ENST00000462623 405 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC140172.1-201ENST00000502928 141 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 MRPS33P2-201ENST00000507850 322 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 CCNHP1-201ENST00000513311 678 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 RNA5SP360-201ENST00000516555 118 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC004825.1-201ENST00000555068 586 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC087283.1-201ENST00000604029 1074 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 IMMP1LP3-201ENST00000604197 224 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC092953.2-201ENST00000608000 699 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC023509.5-201ENST00000617434 807 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AL669942.2-201ENST00000620352 697 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC091905.2-201ENST00000623143 306 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AL049767.1-202ENST00000637826 242 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 RN7SKP160-201ENST00000363804 340 ntBASIC5.66□□□□□ -1.5
UPF2Q9HAU5 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 RPL12P43-201ENST00000420608 499 ntBASIC5.66□□□□□ -1.5
UPF2Q9HAU5 TRIM60P13-201ENST00000432350 1283 ntBASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AL500527.1-201ENST00000448532 255 ntBASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AC010547.7-201ENST00000570323 333 ntBASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AC020910.3-201ENST00000603701 874 ntBASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AC093799.2-201ENST00000610062 578 ntBASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AL353726.1-201ENST00000614041 1000 ntBASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AL109620.1-201ENST00000618738 1197 ntBASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AC104118.1-201ENST00000607625 1589 ntBASIC5.66□□□□□ -1.5
UPF2Q9HAU5 AC007382.1-201ENST00000624376 2618 ntBASIC5.66□□□□□ -1.5
UPF2Q9HAU5 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPF2Q9HAU5 OR51H2P-202ENST00000641424 3046 ntBASIC5.66□□□□□ -1.5
UPF2Q9HAU5 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 A2MP1-204ENST00000566278 4130 ntBASIC5.65□□□□□ -1.5
UPF2Q9HAU5 RNA5SP22-201ENST00000365393 109 ntBASIC5.65□□□□□ -1.5
UPF2Q9HAU5 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 FCF1P5-201ENST00000406490 482 ntBASIC5.65□□□□□ -1.5
UPF2Q9HAU5 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 GJA6P-201ENST00000415117 1042 ntBASIC5.65□□□□□ -1.5
UPF2Q9HAU5 RPL7P11-201ENST00000437586 658 ntBASIC5.65□□□□□ -1.5
UPF2Q9HAU5 RPS27AP15-201ENST00000447672 466 ntBASIC5.65□□□□□ -1.5
UPF2Q9HAU5 AL606490.1-201ENST00000452266 765 ntBASIC5.65□□□□□ -1.5
UPF2Q9HAU5 AC016724.1-201ENST00000453215 421 ntBASIC5.65□□□□□ -1.5
UPF2Q9HAU5 MTND3P4-201ENST00000453537 303 ntBASIC5.65□□□□□ -1.5
UPF2Q9HAU5 AC079168.2-201ENST00000453977 416 ntBASIC5.65□□□□□ -1.5
UPF2Q9HAU5 TPRKBP1-201ENST00000456243 481 ntBASIC5.65□□□□□ -1.5
UPF2Q9HAU5 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 RN7SL174P-201ENST00000475578 289 ntBASIC5.65□□□□□ -1.5
UPF2Q9HAU5 RPS18P6-201ENST00000476880 458 ntBASIC5.65□□□□□ -1.5
UPF2Q9HAU5 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.65□□□□□ -1.5
UPF2Q9HAU5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms