Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 AMD1P2-201ENST00000412936 992 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 SPA17P1-201ENST00000416656 452 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC127526.2-201ENST00000426436 775 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 ISCA1P6-201ENST00000427740 390 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC239367.3-201ENST00000428996 814 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC239800.1-201ENST00000442049 719 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 YWHAQP9-201ENST00000445891 512 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 MGAT2P1-201ENST00000449718 797 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC005517.1-201ENST00000452091 489 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 OR6K1P-201ENST00000456766 971 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 RPS26P11-201ENST00000463445 348 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 RPS26P6-201ENST00000475156 348 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 RPS29P25-201ENST00000481709 171 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC007182.2-201ENST00000489251 402 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 RPL35P6-201ENST00000490024 372 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC106872.3-201ENST00000495104 446 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 RPL23AP80-201ENST00000495605 424 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC112204.1-201ENST00000502591 103 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC008126.1-201ENST00000549019 480 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 MIR4307-201ENST00000582802 84 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 NRBF2P1-201ENST00000587407 859 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC097468.3-201ENST00000607956 456 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AL451049.1-201ENST00000608672 497 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AL136295.6-201ENST00000610486 658 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC027506.1-201ENST00000621395 198 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC005753.1-201ENST00000623837 618 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC062029.1-202ENST00000606164 3651 ntBASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
BHLHE41Q9C0J9 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 Y_RNA.142-201ENST00000363491 102 ntBASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 Y_RNA.460-201ENST00000384255 102 ntBASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 MIR506-201ENST00000384998 124 ntBASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 MIR1302-11-201ENST00000408051 138 ntBASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 MIR1302-9-201ENST00000408365 138 ntBASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 MIR1302-10-201ENST00000408734 138 ntBASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 Y_RNA.608-201ENST00000410647 95 ntBASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 RNU6-272P-201ENST00000411028 104 ntBASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 RNU6-195P-201ENST00000411352 109 ntBASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 BTF3L4P3-201ENST00000418879 476 ntBASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 AC009961.2-201ENST00000435771 251 ntBASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 AC092106.2-201ENST00000436597 487 ntBASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 AC009518.3-201ENST00000438972 253 ntBASIC6.41□□□□□ -1.38
BHLHE41Q9C0J9 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms