Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL627171.1-201ENST00000618845 1308 ntBASIC5.95□□□□□ -1.46
ABCA3Q99758 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ABCA3Q99758 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
ABCA3Q99758 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.95□□□□□ -1.46
ABCA3Q99758 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.95□□□□□ -1.46
ABCA3Q99758 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ABCA3Q99758 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ABCA3Q99758 AC008549.2-201ENST00000333482 706 ntBASIC5.95□□□□□ -1.46
ABCA3Q99758 RNA5SP453-201ENST00000362503 119 ntBASIC5.95□□□□□ -1.46
ABCA3Q99758 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.95□□□□□ -1.46
ABCA3Q99758 RNA5SP130-201ENST00000364431 114 ntBASIC5.95□□□□□ -1.46
ABCA3Q99758 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.95□□□□□ -1.46
ABCA3Q99758 AL354766.1-201ENST00000423396 542 ntBASIC5.95□□□□□ -1.46
ABCA3Q99758 AL157831.1-201ENST00000426134 473 ntBASIC5.95□□□□□ -1.46
ABCA3Q99758 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.95□□□□□ -1.46
ABCA3Q99758 AC008739.3-201ENST00000603262 127 ntBASIC5.95□□□□□ -1.46
ABCA3Q99758 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.95□□□□□ -1.46
ABCA3Q99758 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.95□□□□□ -1.46
ABCA3Q99758 AL356121.2-201ENST00000624715 780 ntBASIC5.95□□□□□ -1.46
ABCA3Q99758 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ABCA3Q99758 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
ABCA3Q99758 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
ABCA3Q99758 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ABCA3Q99758 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCA3Q99758 AL035696.2-201ENST00000407941 709 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 COX6B1P7-201ENST00000430845 235 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 CYCSP43-201ENST00000438233 310 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.94□□□□□ -1.46
ABCA3Q99758 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
ABCA3Q99758 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.94□□□□□ -1.46
ABCA3Q99758 TRMT10BP1-201ENST00000519377 943 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.94□□□□□ -1.46
ABCA3Q99758 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCA3Q99758 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.94□□□□□ -1.46
ABCA3Q99758 AC053481.4-201ENST00000583164 216 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 AC024220.1-201ENST00000603675 484 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 MIR6075-201ENST00000620782 95 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ABCA3Q99758 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
ABCA3Q99758 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCA3Q99758 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ABCA3Q99758 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ABCA3Q99758 RN7SKP235-201ENST00000410662 305 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 MRPL50P1-201ENST00000431951 384 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 AC007389.2-201ENST00000434630 306 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.94□□□□□ -1.46
ABCA3Q99758 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCA3Q99758 AL121834.1-201ENST00000572284 509 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 MIR7151-201ENST00000617477 60 ntBASIC5.94□□□□□ -1.46
ABCA3Q99758 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ABCA3Q99758 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ABCA3Q99758 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ABCA3Q99758 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.93□□□□□ -1.46
ABCA3Q99758 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.93□□□□□ -1.46
ABCA3Q99758 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.93□□□□□ -1.46
ABCA3Q99758 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ABCA3Q99758 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ABCA3Q99758 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ABCA3Q99758 SNORA9-201ENST00000384215 133 ntBASIC5.93□□□□□ -1.46
ABCA3Q99758 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.93□□□□□ -1.46
ABCA3Q99758 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.93□□□□□ -1.46
ABCA3Q99758 AC007738.1-201ENST00000413892 348 ntBASIC5.93□□□□□ -1.46
ABCA3Q99758 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.93□□□□□ -1.46
ABCA3Q99758 AC114495.1-201ENST00000441274 436 ntBASIC5.93□□□□□ -1.46
ABCA3Q99758 CYCSP24-201ENST00000445119 316 ntBASIC5.93□□□□□ -1.46
ABCA3Q99758 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.93□□□□□ -1.46
ABCA3Q99758 RNA5SP246-201ENST00000458909 119 ntBASIC5.93□□□□□ -1.46
ABCA3Q99758 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.93□□□□□ -1.46
ABCA3Q99758 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
ABCA3Q99758 RNA5SP49-201ENST00000516450 115 ntBASIC5.93□□□□□ -1.46
ABCA3Q99758 RNA5SP519-201ENST00000516480 119 ntBASIC5.93□□□□□ -1.46
ABCA3Q99758 OR7E10P-201ENST00000526420 991 ntBASIC5.93□□□□□ -1.46
ABCA3Q99758 AC006349.1-201ENST00000555526 235 ntBASIC5.93□□□□□ -1.46
ABCA3Q99758 BPIFA4P-203ENST00000603168 689 ntBASIC5.93□□□□□ -1.46
ABCA3Q99758 AL161729.3-201ENST00000603533 673 ntBASIC5.93□□□□□ -1.46
ABCA3Q99758 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.93□□□□□ -1.46
ABCA3Q99758 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ABCA3Q99758 AC005261.2-201ENST00000593427 4258 ntBASIC5.93□□□□□ -1.46
ABCA3Q99758 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
ABCA3Q99758 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCA3Q99758 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
ABCA3Q99758 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCA3Q99758 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCA3Q99758 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCA3Q99758 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
ABCA3Q99758 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ABCA3Q99758 MIR3065-201ENST00000390137 79 ntBASIC5.92□□□□□ -1.46
ABCA3Q99758 AC013429.2-201ENST00000418798 781 ntBASIC5.92□□□□□ -1.46
ABCA3Q99758 HMGB3P5-201ENST00000428894 612 ntBASIC5.92□□□□□ -1.46
ABCA3Q99758 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ABCA3Q99758 AC104651.2-201ENST00000447549 528 ntBASIC5.92□□□□□ -1.46
ABCA3Q99758 AC022336.1-201ENST00000475510 337 ntBASIC5.92□□□□□ -1.46
ABCA3Q99758 AC069200.1-201ENST00000609511 323 ntBASIC5.92□□□□□ -1.46
ABCA3Q99758 OR8G7P-201ENST00000616658 848 ntBASIC5.92□□□□□ -1.46
ABCA3Q99758 AC015914.2-201ENST00000618167 288 ntBASIC5.92□□□□□ -1.46
ABCA3Q99758 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCA3Q99758 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
ABCA3Q99758 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms