Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SMG1P6-201ENST00000532337 2930 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.03□□□□□ -1.6
PKP4Q99569 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PKP4Q99569 AC104260.2-201ENST00000623551 3497 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.03□□□□□ -1.6
PKP4Q99569 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PKP4Q99569 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PKP4Q99569 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.03□□□□□ -1.6
PKP4Q99569 Z95331.1-201ENST00000623075 23112 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.03□□□□□ -1.6
PKP4Q99569 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.03□□□□□ -1.6
PKP4Q99569 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PKP4Q99569 MIR122-201ENST00000385044 85 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 MIR223-201ENST00000385204 110 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.03□□□□□ -1.6
PKP4Q99569 AL355433.1-201ENST00000422804 300 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.03□□□□□ -1.6
PKP4Q99569 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.03□□□□□ -1.6
PKP4Q99569 PRPF38AP1-201ENST00000451976 933 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 AL354710.1-201ENST00000453641 246 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 MTCO2P9-201ENST00000503214 694 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 AC021087.2-201ENST00000504656 1203 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 AC010468.3-201ENST00000508225 458 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 RNA5SP228-201ENST00000516232 133 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.03□□□□□ -1.6
PKP4Q99569 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.03□□□□□ -1.6
PKP4Q99569 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.03□□□□□ -1.6
PKP4Q99569 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.03□□□□□ -1.6
PKP4Q99569 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.03□□□□□ -1.6
PKP4Q99569 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.03□□□□□ -1.6
PKP4Q99569 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.03□□□□□ -1.6
PKP4Q99569 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.03□□□□□ -1.6
PKP4Q99569 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.03□□□□□ -1.6
PKP4Q99569 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
PKP4Q99569 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.03□□□□□ -1.6
PKP4Q99569 AC095055.1-201ENST00000603472 1113 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.03□□□□□ -1.6
PKP4Q99569 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.03□□□□□ -1.6
PKP4Q99569 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.03□□□□□ -1.6
PKP4Q99569 AL512624.1-201ENST00000613638 469 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 AC018926.1-201ENST00000616335 435 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.03□□□□□ -1.6
PKP4Q99569 AC099654.9-201ENST00000637055 678 ntBASIC5.03□□□□□ -1.6
PKP4Q99569 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PKP4Q99569 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
PKP4Q99569 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PKP4Q99569 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PKP4Q99569 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PKP4Q99569 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.03□□□□□ -1.6
PKP4Q99569 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PKP4Q99569 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.03□□□□□ -1.6
PKP4Q99569 MUC2-202ENST00000613187 4845 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PKP4Q99569 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.02□□□□□ -1.61
PKP4Q99569 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PKP4Q99569 PHKBP1-201ENST00000450951 1951 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
PKP4Q99569 AC009313.2-201ENST00000417893 1941 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 OR4K17-201ENST00000315543 1032 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PKP4Q99569 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PKP4Q99569 SNORA17.1-201ENST00000362945 126 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PKP4Q99569 RNU6-31P-201ENST00000384388 108 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PKP4Q99569 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PKP4Q99569 RNU6-1000P-201ENST00000391066 106 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 NCSTNP1-201ENST00000406229 144 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 RNU2-50P-201ENST00000410494 143 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 RN7SKP126-201ENST00000411143 300 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.02□□□□□ -1.61
PKP4Q99569 COX5BP7-201ENST00000414780 274 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PKP4Q99569 AC009238.2-201ENST00000431026 355 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 MRPL50P1-201ENST00000431951 384 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.02□□□□□ -1.61
PKP4Q99569 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.02□□□□□ -1.61
PKP4Q99569 CNOT7P2-201ENST00000441051 832 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.02□□□□□ -1.61
PKP4Q99569 AC245517.2-201ENST00000442890 346 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 RPL7AP52-201ENST00000458096 790 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 AC079841.1-201ENST00000481228 950 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 AC097173.1-201ENST00000505862 819 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 HIGD1AP14-201ENST00000507617 282 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 HMGB1P47-201ENST00000511281 589 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.02□□□□□ -1.61
PKP4Q99569 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.02□□□□□ -1.61
PKP4Q99569 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.02□□□□□ -1.61
PKP4Q99569 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.02□□□□□ -1.61
PKP4Q99569 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PKP4Q99569 SETP1-201ENST00000556014 845 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.02□□□□□ -1.61
PKP4Q99569 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.02□□□□□ -1.61
PKP4Q99569 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.02□□□□□ -1.61
PKP4Q99569 AC004223.2-201ENST00000590309 544 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 SUMO2P15-201ENST00000604285 278 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 AL355802.4-201ENST00000607635 548 ntBASIC5.02□□□□□ -1.61
PKP4Q99569 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.02□□□□□ -1.61
PKP4Q99569 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.02□□□□□ -1.61
PKP4Q99569 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms