Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 MTCO1P7-201ENST00000419523 1542 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC02019-201ENST00000608605 2060 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 MTHFD2P5-201ENST00000320415 844 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 RNA5SP91-201ENST00000390902 119 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 FCF1P9-201ENST00000412546 282 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AL513325.1-201ENST00000417716 1034 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 ELOCP9-201ENST00000418624 239 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 NANOGP2-201ENST00000435391 727 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 GAPDHP48-201ENST00000436626 961 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 RPS24P1-201ENST00000438550 371 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AL589880.1-201ENST00000448271 287 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AP000542.1-201ENST00000448473 371 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 NECAP1P2-201ENST00000455668 727 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AL133477.1-201ENST00000457472 514 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 RPL7P41-201ENST00000485823 957 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 MTAPP1-201ENST00000489154 819 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 PDCL3P4-201ENST00000489621 720 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 DUTP1-201ENST00000493631 470 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC090058.1-201ENST00000498788 435 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 FABP5P6-201ENST00000510588 409 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 RNU6-232P-201ENST00000517144 64 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 MIR4311-201ENST00000580794 100 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 RN7SL753P-201ENST00000581238 290 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC008759.1-201ENST00000589783 983 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AL589674.2-201ENST00000604304 337 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 LSM1P2-201ENST00000604911 322 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 U6atac.1-201ENST00000616025 117 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AL008636.1-201ENST00000625038 1018 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AL049767.1-202ENST00000637826 242 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC025470.1-201ENST00000510053 2032 ntBASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP1Q96SZ6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC114786.1-201ENST00000512892 1415 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 SRRM1P3-201ENST00000426911 2678 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 ANKRD36P1-201ENST00000344424 659 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 ATP5F1P3-201ENST00000397213 657 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AL391422.1-201ENST00000402155 436 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms