Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 NEAT1-202ENST00000501122 22743 ntBASIC4.85□□□□□ -1.63
C9orf72Q96LT7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 AL121950.1-201ENST00000624993 2077 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 RNA5SP443-201ENST00000363083 132 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 RN7SKP115-201ENST00000363177 317 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 AL672167.2-201ENST00000377164 879 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 RNA5SP87-201ENST00000384155 118 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 GTF2IP5-201ENST00000414608 731 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 USP9YP9-201ENST00000429406 715 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 AC008072.1-201ENST00000434254 824 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 RPL7L1P1-201ENST00000448259 785 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 BGLT3-201ENST00000564523 994 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 AL031320.1-201ENST00000604177 357 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 AC096586.2-201ENST00000610260 441 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 MIR6748-201ENST00000610433 71 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 MIR6820-201ENST00000611508 62 ntBASIC4.84□□□□□ -1.63
C9orf72Q96LT7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf72Q96LT7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
C9orf72Q96LT7 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.84□□□□□ -1.64
C9orf72Q96LT7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
C9orf72Q96LT7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.64
C9orf72Q96LT7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AL136164.3-201ENST00000624429 3978 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 SEPT7P8-201ENST00000413308 775 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 RPL12P43-201ENST00000420608 499 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 Z74021.1-201ENST00000423610 407 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 TMX2P1-201ENST00000436507 708 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 RPL7P11-201ENST00000437586 658 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AL450263.2-201ENST00000439400 589 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 RPS29P22-201ENST00000472363 168 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AC007686.1-201ENST00000488511 463 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AC021146.3-201ENST00000511911 260 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 TCP11X3P-202ENST00000514289 1254 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 GCSHP4-201ENST00000538792 439 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 GSTP1P1-201ENST00000548078 319 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AC018552.1-201ENST00000562099 811 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AC234775.3-201ENST00000564612 656 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AP001521.2-201ENST00000608772 546 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AL159169.2-201ENST00000610061 1269 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AL121890.2-201ENST00000617644 465 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AC140113.4-201ENST00000622087 222 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AC004232.3-201ENST00000622977 525 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 SMG1P6-201ENST00000532337 2930 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AC093775.1-201ENST00000624154 1868 ntBASIC4.83□□□□□ -1.64
C9orf72Q96LT7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf72Q96LT7 AC132825.1-201ENST00000463573 2247 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 MAPK10-320ENST00000641462 6696 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms