Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 RN7SL466P-201ENST00000497546 295 ntBASIC5.52□□□□□ -1.53
RNF31Q96EP0 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF31Q96EP0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF31Q96EP0 MIR2117-201ENST00000516780 80 ntBASIC5.52□□□□□ -1.53
RNF31Q96EP0 TMEM97P2-201ENST00000517841 403 ntBASIC5.52□□□□□ -1.53
RNF31Q96EP0 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF31Q96EP0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF31Q96EP0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.52□□□□□ -1.53
RNF31Q96EP0 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF31Q96EP0 PDCL2P2-201ENST00000533651 189 ntBASIC5.52□□□□□ -1.53
RNF31Q96EP0 AP001804.2-201ENST00000533932 910 ntBASIC5.52□□□□□ -1.53
RNF31Q96EP0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.52□□□□□ -1.53
RNF31Q96EP0 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.52□□□□□ -1.53
RNF31Q96EP0 AC007599.1-201ENST00000568688 1174 ntBASIC5.52□□□□□ -1.53
RNF31Q96EP0 MIR1269B-201ENST00000580405 75 ntBASIC5.52□□□□□ -1.53
RNF31Q96EP0 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF31Q96EP0 MRPS35P3-201ENST00000603189 709 ntBASIC5.52□□□□□ -1.53
RNF31Q96EP0 AC011374.2-201ENST00000607135 526 ntBASIC5.52□□□□□ -1.53
RNF31Q96EP0 AL158163.2-201ENST00000619110 700 ntBASIC5.52□□□□□ -1.53
RNF31Q96EP0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF31Q96EP0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF31Q96EP0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF31Q96EP0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF31Q96EP0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF31Q96EP0 AC016745.2-201ENST00000608834 3443 ntBASIC5.52□□□□□ -1.53
RNF31Q96EP0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF31Q96EP0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
RNF31Q96EP0 C4BPAP1-201ENST00000415474 1893 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 OR9K1P-201ENST00000326513 941 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 MIR133A2-201ENST00000347538 102 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 AL159987.1-201ENST00000347911 293 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 RN7SKP160-201ENST00000363804 340 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 RNA5SP211-201ENST00000365516 117 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 ATP5HP3-201ENST00000396994 486 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 SETP15-201ENST00000412724 337 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 HMGB3P31-201ENST00000413333 595 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 TNPO1P1-201ENST00000423641 1138 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 CFL1P1-202ENST00000432948 411 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 AL035458.1-201ENST00000433096 585 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 UBE2D3P4-201ENST00000441973 436 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 CUBNP2-201ENST00000443534 1139 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 RPL23AP60-201ENST00000450011 454 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 RPL7P32-201ENST00000457119 744 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 AL133477.1-201ENST00000457472 514 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC022215.1-201ENST00000481770 362 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 OR7E157P-201ENST00000494376 911 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 RNU6-615P-201ENST00000516065 106 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC091078.2-201ENST00000557145 559 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC068020.1-201ENST00000594215 661 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC130352.1-201ENST00000602979 661 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC105129.3-201ENST00000605455 485 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 OR2AS2P-201ENST00000606902 342 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 AC091965.5-201ENST00000624785 342 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 AP005435.3-201ENST00000531260 3198 ntBASIC5.51□□□□□ -1.53
RNF31Q96EP0 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms