Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 GAPDHP37-201ENST00000442317 968 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 POU5F1P5-201ENST00000445059 658 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 AL133351.3-201ENST00000454998 193 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 APOOP2-201ENST00000461561 539 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 AC094085.1-201ENST00000468914 584 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 RPL23AP71-201ENST00000470966 469 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 AL163973.1-201ENST00000484753 577 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 AC034222.1-201ENST00000494052 532 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 AC010587.1-201ENST00000505809 469 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC7.48□□□□□ -1.21
HLA-CQ95604 AC026782.1-201ENST00000512952 449 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.48□□□□□ -1.21
HLA-CQ95604 RNU6-714P-201ENST00000516963 103 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 AC008562.1-201ENST00000521763 330 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC7.48□□□□□ -1.21
HLA-CQ95604 COX6CP8-201ENST00000522620 226 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 IGKV3D-34-201ENST00000522638 302 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 AP003122.3-201ENST00000526316 255 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
HLA-CQ95604 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-CQ95604 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC7.48□□□□□ -1.21
HLA-CQ95604 AC090312.1-201ENST00000580637 348 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-CQ95604 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC7.48□□□□□ -1.21
HLA-CQ95604 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.48□□□□□ -1.21
HLA-CQ95604 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-CQ95604 AC004908.2-201ENST00000609090 574 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 AL136097.3-201ENST00000611097 505 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 AC015712.7-201ENST00000615211 635 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 AC005899.7-201ENST00000618199 588 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 OR2L1P-202ENST00000641567 1023 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
HLA-CQ95604 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-CQ95604 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-CQ95604 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
HLA-CQ95604 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.48□□□□□ -1.21
HLA-CQ95604 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
HLA-CQ95604 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
HLA-CQ95604 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC7.48□□□□□ -1.21
HLA-CQ95604 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-CQ95604 AC068860.1-201ENST00000623701 3736 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 AC013488.1-201ENST00000526618 1838 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 SND1-IT1-201ENST00000623342 2481 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
HLA-CQ95604 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.47□□□□□ -1.21
HLA-CQ95604 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
HLA-CQ95604 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.47□□□□□ -1.21
HLA-CQ95604 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC7.47□□□□□ -1.21
HLA-CQ95604 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
HLA-CQ95604 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 RPL23AP57-201ENST00000332361 466 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
HLA-CQ95604 Y_RNA.187-201ENST00000363918 113 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 Y_RNA.193-201ENST00000363979 102 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 Y_RNA.231-201ENST00000364358 102 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 RNA5SP279-201ENST00000365513 117 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
HLA-CQ95604 RNU4-70P-201ENST00000384579 139 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 RNU2-9P-201ENST00000410194 145 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 AC234782.4-201ENST00000417646 1048 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC7.47□□□□□ -1.21
HLA-CQ95604 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-CQ95604 RPL5P34-201ENST00000426545 891 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.47□□□□□ -1.21
HLA-CQ95604 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-CQ95604 RPS10P21-201ENST00000430654 475 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 ERLEC1P1-201ENST00000433806 578 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-CQ95604 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-CQ95604 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-CQ95604 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 AC090142.1-201ENST00000465776 462 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-CQ95604 MTND4P17-201ENST00000470444 350 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.47□□□□□ -1.21
HLA-CQ95604 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.47□□□□□ -1.21
HLA-CQ95604 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-CQ95604 RN7SKP196-201ENST00000516267 345 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 RNA5SP318-201ENST00000516352 92 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 PCNAP4-201ENST00000532690 730 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 AP002373.2-201ENST00000541631 1060 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-CQ95604 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.47□□□□□ -1.21
HLA-CQ95604 AL121579.2-201ENST00000555466 590 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-CQ95604 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
HLA-CQ95604 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.47□□□□□ -1.21
HLA-CQ95604 OR10AB1P-201ENST00000609613 938 ntBASIC7.47□□□□□ -1.21
HLA-CQ95604 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
HLA-CQ95604 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
HLA-CQ95604 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-CQ95604 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms