Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.84□□□□□ -1.64
TM9SF4Q92544 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 AC010132.2-201ENST00000295493 1043 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 MIR365B-201ENST00000362317 111 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 SNORD115-48-201ENST00000364764 76 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 SNORA72.3-201ENST00000365074 132 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 RPS4XP9-201ENST00000405151 780 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 VN1R37P-201ENST00000419096 748 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 AC104837.2-201ENST00000427236 424 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 ZNF965P-201ENST00000432501 817 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 PRPF38AP2-201ENST00000438179 851 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 ARL5AP3-201ENST00000439327 386 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 SNRPFP2-201ENST00000440710 251 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 MTATP6P14-201ENST00000455189 673 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 snoU13.20-201ENST00000459180 104 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 CABYRP1-201ENST00000465493 1045 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 BX284632.1-201ENST00000478218 541 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 MTCO2P9-201ENST00000503214 694 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 AK4P6-201ENST00000505168 528 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 SCARNA1-201ENST00000517138 166 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 AC067904.2-201ENST00000517322 1283 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 AC097504.2-201ENST00000608088 454 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 AF129408.1-201ENST00000608767 431 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 MIR6839-201ENST00000620425 113 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 AC090772.4-201ENST00000623599 362 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
TM9SF4Q92544 AC100778.3-201ENST00000580060 1750 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 AL450345.1-202ENST00000605741 3881 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF4Q92544 AC000374.1-201ENST00000434698 1745 ntBASIC4.83□□□□□ -1.64
TM9SF4Q92544 SAMMSON-213ENST00000641336 1521 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TM9SF4Q92544 SMG1P7-201ENST00000565246 2704 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TM9SF4Q92544 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TM9SF4Q92544 NXF4-202ENST00000416098 1465 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TM9SF4Q92544 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TM9SF4Q92544 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TM9SF4Q92544 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TM9SF4Q92544 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
TM9SF4Q92544 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TM9SF4Q92544 RNA5SP123-201ENST00000363244 119 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 RN7SKP153-201ENST00000365026 316 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 AC136624.1-201ENST00000400791 413 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 RN7SKP16-201ENST00000410180 299 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 COX6B1P1-201ENST00000415962 213 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.82□□□□□ -1.64
TM9SF4Q92544 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.82□□□□□ -1.64
TM9SF4Q92544 AC073310.1-201ENST00000423226 1033 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.82□□□□□ -1.64
TM9SF4Q92544 MRPL50P1-201ENST00000431951 384 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 AL049745.1-201ENST00000433953 286 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.82□□□□□ -1.64
TM9SF4Q92544 MTND2P21-201ENST00000436242 1042 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.82□□□□□ -1.64
TM9SF4Q92544 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.82□□□□□ -1.64
TM9SF4Q92544 RPL31P44-201ENST00000447680 377 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.82□□□□□ -1.64
TM9SF4Q92544 MTND2P6-201ENST00000455337 1030 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 AC092324.1-201ENST00000468671 324 ntBASIC4.82□□□□□ -1.64
TM9SF4Q92544 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.82□□□□□ -1.64
TM9SF4Q92544 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.82□□□□□ -1.64
TM9SF4Q92544 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms