Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 SNRPFP1-201ENST00000414761 252 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 QRSL1P2-201ENST00000418582 964 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 REREP1Y-201ENST00000422655 198 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 RPL7AP49-201ENST00000429522 581 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AL591438.1-201ENST00000433508 581 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 REREP2Y-201ENST00000439103 200 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 NPM1P21-201ENST00000513394 762 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AC010503.3-201ENST00000594355 540 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 LSM1P2-201ENST00000604911 322 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 MIR3653-201ENST00000625572 110 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AC020633.1-201ENST00000468439 2247 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 MT-RNR1-201ENST00000389680 954 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 HMGB3P5-201ENST00000428894 612 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AC146944.2-203ENST00000502493 354 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AC139495.1-202ENST00000513164 354 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 MIR8059-201ENST00000620427 81 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 CPHL1P-201ENST00000461341 3407 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AL731532.2-201ENST00000623542 1953 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 RPL5P32-201ENST00000454085 879 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AC090142.1-201ENST00000465776 462 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AP000889.1-201ENST00000530968 660 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AL049830.4-201ENST00000555149 351 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AC090181.2-201ENST00000602975 672 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AL157385.1-201ENST00000446973 268 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AL157884.3-201ENST00000448273 1184 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 RNU6-513P-201ENST00000516104 104 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AC026403.1-201ENST00000518938 295 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 HMGN2P47-201ENST00000559378 272 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 HNRNPCP4-201ENST00000571636 900 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 OR51C1P-201ENST00000608504 942 ntBASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.09□□□□□ -1.91
ALMS1Q8TCU4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
ALMS1Q8TCU4 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ALMS1Q8TCU4 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC3.09□□□□□ -1.92
ALMS1Q8TCU4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC3.09□□□□□ -1.92
ALMS1Q8TCU4 BTF3P10-201ENST00000433415 495 ntBASIC3.09□□□□□ -1.92
ALMS1Q8TCU4 TPT1P1-201ENST00000458495 518 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms