Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 THAP12P5-201ENST00000405864 2275 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 TET1P1-201ENST00000426627 2301 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AL357515.1-201ENST00000402967 542 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AL158073.1-201ENST00000426848 1104 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 ENPP7P9-201ENST00000514456 627 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 SNORA31.9-201ENST00000516429 84 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 PMS2P3-207ENST00000529061 717 ntBASIC1.45□□□□□ -2.18
SYNE1Q8NF91 RERGL-202ENST00000536890 367 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC1.45□□□□□ -2.18
SYNE1Q8NF91 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 ALB-202ENST00000401494 1659 ntTSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 MIR133A2-201ENST00000347538 102 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 SCP2-206ENST00000430330 938 ntTSL 2 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 TRIM36-IT1-201ENST00000503723 881 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC011477.5-201ENST00000586571 259 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC005191.1-201ENST00000603950 358 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC018695.5-201ENST00000605872 315 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AL139124.1-201ENST00000609123 421 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AL672167.1-204ENST00000641875 3017 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC126323.6-202ENST00000568092 3511 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 MIR659-201ENST00000384963 97 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 RPL7AP25-201ENST00000423357 805 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AP001324.1-201ENST00000428553 399 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC053481.1-201ENST00000467217 306 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 MIR5699-201ENST00000578903 90 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 RNU1-64P-201ENST00000365443 163 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 U3.23-201ENST00000391132 200 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC091390.3-201ENST00000426478 338 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 RPS12P10-201ENST00000427031 377 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC007016.1-201ENST00000512110 244 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC027807.1-201ENST00000559921 996 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 ADAD1P2-201ENST00000588476 646 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AL356218.2-201ENST00000605264 187 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC073137.1-201ENST00000605636 634 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AL133243.1-201ENST00000614487 366 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 OR52E3P-201ENST00000452083 936 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AL109766.1-201ENST00000555080 552 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SYNE1Q8NF91 EIF1P5-201ENST00000585002 234 ntBASIC1.44□□□□□ -2.18
SYNE1Q8NF91 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms