Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 RNU2-72P-201ENST00000411175 163 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 RNU4-74P-201ENST00000411280 161 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AL590762.4-201ENST00000425885 253 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 MTCYBP21-201ENST00000443300 1113 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 RPL7P61-201ENST00000451721 751 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 RN7SL189P-201ENST00000468631 289 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AC025459.1-201ENST00000504072 156 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AC010468.3-201ENST00000508225 458 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AC012400.1-201ENST00000518452 381 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AC013701.1-201ENST00000522657 465 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 OSBPL9P3-201ENST00000534523 595 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AL671309.1-201ENST00000603750 544 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AC092079.1-201ENST00000558620 1985 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AC024341.1-201ENST00000526444 1552 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 AC007996.1-201ENST00000620414 2821 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 MIR142-201ENST00000384835 87 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 HMGB1P10-201ENST00000395823 563 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 NUDT19P3-201ENST00000404698 555 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 TATDN1P1-201ENST00000414123 891 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 GNG5P5-201ENST00000420444 220 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 AL590609.2-201ENST00000421430 368 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 RPS4XP16-201ENST00000427198 791 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 FO393419.3-201ENST00000428741 282 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 AC073508.1-201ENST00000428866 656 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 RPL7AP61-201ENST00000443410 636 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 RPL21P6-201ENST00000479171 504 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 MTND3P24-201ENST00000506306 329 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 OR8A2P-201ENST00000528631 952 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 MIR4700-201ENST00000578311 74 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 AC073869.10-201ENST00000642016 354 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 AP000756.2-201ENST00000624168 2567 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 AC000374.1-201ENST00000434698 1745 ntBASIC5.28□□□□□ -1.56
PRPF39Q86UA1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.28□□□□□ -1.56
PRPF39Q86UA1 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 RNU4-4P-201ENST00000364588 130 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AC093719.1-202ENST00000392735 373 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 OR8V1P-201ENST00000395193 873 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 RNU2-17P-201ENST00000410290 190 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AL139128.1-201ENST00000413921 941 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 TRGV6-201ENST00000417928 299 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 MTCO1P52-201ENST00000433928 531 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms