Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PCDH1Q08174 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 GDI2P1-201ENST00000429312 1336 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 TATDN2P3-201ENST00000452855 3665 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC110373.1-201ENST00000505994 3505 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDH1Q08174 AL731556.1-201ENST00000394628 3711 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC062022.1-201ENST00000451026 1684 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
PCDH1Q08174 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH1Q08174 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.45□□□□□ -1.38
PCDH1Q08174 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH1Q08174 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
PCDH1Q08174 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PCDH1Q08174 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PCDH1Q08174 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH1Q08174 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 OR52E6-202ENST00000379946 954 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 MIR320B1-201ENST00000390209 79 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
PCDH1Q08174 U8.14-201ENST00000390843 143 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 ZNF37CP-201ENST00000406795 241 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 RN7SKP129-201ENST00000410288 299 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.45□□□□□ -1.38
PCDH1Q08174 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH1Q08174 RPL7P4-203ENST00000430239 730 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 RPL7P11-201ENST00000437586 658 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 RABEPKP1-201ENST00000440529 1026 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 TXNP5-201ENST00000441043 315 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 BMS1P10-201ENST00000443754 1120 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.45□□□□□ -1.38
PCDH1Q08174 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.45□□□□□ -1.38
PCDH1Q08174 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH1Q08174 RPL7AP23-201ENST00000482625 776 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 AC092824.1-201ENST00000483524 576 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 RN7SL37P-201ENST00000490461 307 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.45□□□□□ -1.38
PCDH1Q08174 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.45□□□□□ -1.38
PCDH1Q08174 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH1Q08174 AC018710.1-201ENST00000506509 158 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.45□□□□□ -1.38
PCDH1Q08174 AC106872.4-201ENST00000510050 523 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 AC108064.1-201ENST00000513791 460 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.45□□□□□ -1.38
PCDH1Q08174 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.45□□□□□ -1.38
PCDH1Q08174 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC6.45□□□□□ -1.38
PCDH1Q08174 MTND1P35-201ENST00000526739 508 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 DEFB131D-201ENST00000526803 184 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 OR5AP1P-201ENST00000529730 940 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.45□□□□□ -1.38
PCDH1Q08174 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.45□□□□□ -1.38
PCDH1Q08174 ANP32BP1-202ENST00000568553 737 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH1Q08174 AC091133.5-201ENST00000603088 301 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 AL137000.1-201ENST00000610528 1244 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 PART1_1.1-201ENST00000611761 217 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 AC243756.2-201ENST00000618406 463 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 AC006328.2-201ENST00000623198 397 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 AC012005.2-201ENST00000624333 397 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.45□□□□□ -1.38
PCDH1Q08174 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.45□□□□□ -1.38
PCDH1Q08174 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
PCDH1Q08174 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH1Q08174 AC245100.2-201ENST00000454544 1679 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PCDH1Q08174 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
PCDH1Q08174 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.45□□□□□ -1.38
PCDH1Q08174 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.45□□□□□ -1.38
PCDH1Q08174 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH1Q08174 QRSL1P1-201ENST00000400977 1540 ntBASIC6.45□□□□□ -1.38
PCDH1Q08174 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH1Q08174 MTCO1P14-201ENST00000441695 1559 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
PCDH1Q08174 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 RNU6-216P-201ENST00000363282 104 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 RNA5SP512-201ENST00000364550 120 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 RNU6-877P-201ENST00000383868 107 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PCDH1Q08174 MRPL32P1-201ENST00000406301 247 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms