Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NKX6-1P78426 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 RNU1-134P-201ENST00000362935 165 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 RNU6-839P-201ENST00000363347 108 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 SNORD8-201ENST00000363915 110 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 SNORA43.1-201ENST00000364863 140 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.34□□□□□ -1.55
NKX6-1P78426 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.34□□□□□ -1.55
NKX6-1P78426 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 MIR433-201ENST00000384837 93 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 ATP5F1P3-201ENST00000397213 657 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 RSL24D1P4-201ENST00000400938 484 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 MIR1302-8-201ENST00000408342 128 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 RNA5SP80-201ENST00000410475 111 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.34□□□□□ -1.55
NKX6-1P78426 AC011233.1-201ENST00000422812 283 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 AL390023.1-201ENST00000428836 262 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.34□□□□□ -1.55
NKX6-1P78426 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.34□□□□□ -1.55
NKX6-1P78426 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.34□□□□□ -1.55
NKX6-1P78426 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.34□□□□□ -1.55
NKX6-1P78426 RPS3AP43-201ENST00000479743 781 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 AC124945.1-201ENST00000485133 188 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 AC079395.1-201ENST00000510981 262 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 Y_RNA.667-201ENST00000516212 107 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 Y_RNA.710-201ENST00000516975 110 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.34□□□□□ -1.55
NKX6-1P78426 AC090819.1-201ENST00000523800 1111 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 AP005639.1-201ENST00000526939 192 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.34□□□□□ -1.55
NKX6-1P78426 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.34□□□□□ -1.55
NKX6-1P78426 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.34□□□□□ -1.55
NKX6-1P78426 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.34□□□□□ -1.55
NKX6-1P78426 AC040904.1-201ENST00000590850 223 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 AL137072.1-201ENST00000603444 466 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 DUXAP11-201ENST00000603858 526 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 AL390816.3-201ENST00000604527 1066 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 AC106791.2-201ENST00000604680 391 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.34□□□□□ -1.55
NKX6-1P78426 AC243654.2-201ENST00000612843 443 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 AC234782.5-201ENST00000617723 324 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.34□□□□□ -1.55
NKX6-1P78426 AC124312.6-202ENST00000623624 418 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 AC099654.6-201ENST00000636487 512 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 BCORP1-203ENST00000513194 5093 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 AC009313.2-201ENST00000417893 1941 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
NKX6-1P78426 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.34□□□□□ -1.56
NKX6-1P78426 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.34□□□□□ -1.56
NKX6-1P78426 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NKX6-1P78426 AC053481.2-202ENST00000582394 1500 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NKX6-1P78426 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.33□□□□□ -1.56
NKX6-1P78426 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.33□□□□□ -1.56
NKX6-1P78426 AC025470.1-201ENST00000510053 2032 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AL049737.1-201ENST00000413920 1403 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.33□□□□□ -1.56
NKX6-1P78426 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.33□□□□□ -1.56
NKX6-1P78426 DBF4P1-201ENST00000412976 1892 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX6-1P78426 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NKX6-1P78426 SNORA21-201ENST00000362423 132 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 RNA5SP273-201ENST00000362484 113 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 RNU6-1066P-201ENST00000363573 105 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
NKX6-1P78426 RNU6-1300P-201ENST00000391046 108 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.33□□□□□ -1.56
NKX6-1P78426 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX6-1P78426 RN7SKP286-201ENST00000410894 299 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 RN7SKP161-201ENST00000411110 305 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AL513325.1-201ENST00000417716 1034 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC098592.1-201ENST00000419352 333 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AL121776.1-201ENST00000429337 372 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC005345.1-201ENST00000431868 217 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX6-1P78426 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.33□□□□□ -1.56
NKX6-1P78426 PCBP2P1-201ENST00000437262 977 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.33□□□□□ -1.56
NKX6-1P78426 GAPDHP23-201ENST00000444823 993 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 RPS27AP15-201ENST00000447672 466 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC002553.3-201ENST00000453002 341 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX6-1P78426 RNU7-125P-201ENST00000458760 62 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 snoU13.29-201ENST00000459370 104 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX6-1P78426 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX6-1P78426 RPS27P23-201ENST00000487608 251 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC109471.1-201ENST00000511631 612 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC010587.2-201ENST00000511727 448 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC114781.3-201ENST00000512083 142 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms