Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 SUMO2P1-206ENST00000445436 284 ntBASIC5.66□□□□□ -1.5
CIITAP33076 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.66□□□□□ -1.5
CIITAP33076 HIGD1AP8-201ENST00000453927 274 ntBASIC5.66□□□□□ -1.5
CIITAP33076 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.66□□□□□ -1.5
CIITAP33076 AC021660.1-201ENST00000465006 554 ntBASIC5.66□□□□□ -1.5
CIITAP33076 RN7SL319P-201ENST00000480656 221 ntBASIC5.66□□□□□ -1.5
CIITAP33076 AC090543.1-201ENST00000492168 485 ntBASIC5.66□□□□□ -1.5
CIITAP33076 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.66□□□□□ -1.5
CIITAP33076 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.66□□□□□ -1.5
CIITAP33076 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.66□□□□□ -1.5
CIITAP33076 SNORA76.2-201ENST00000517095 137 ntBASIC5.66□□□□□ -1.5
CIITAP33076 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.66□□□□□ -1.5
CIITAP33076 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.66□□□□□ -1.5
CIITAP33076 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.66□□□□□ -1.5
CIITAP33076 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.66□□□□□ -1.5
CIITAP33076 AC093510.2-201ENST00000562820 896 ntBASIC5.66□□□□□ -1.5
CIITAP33076 OR1F2P-201ENST00000570470 933 ntBASIC5.66□□□□□ -1.5
CIITAP33076 AC011840.5-201ENST00000582125 771 ntBASIC5.66□□□□□ -1.5
CIITAP33076 AC006116.5-201ENST00000591936 559 ntBASIC5.66□□□□□ -1.5
CIITAP33076 AC011487.3-201ENST00000593607 453 ntBASIC5.66□□□□□ -1.5
CIITAP33076 HMGB1P51-201ENST00000605166 638 ntBASIC5.66□□□□□ -1.5
CIITAP33076 AC005156.1-201ENST00000613371 573 ntBASIC5.66□□□□□ -1.5
CIITAP33076 AC068880.4-201ENST00000623082 495 ntBASIC5.66□□□□□ -1.5
CIITAP33076 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.66□□□□□ -1.5
CIITAP33076 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CIITAP33076 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CIITAP33076 AC009501.3-201ENST00000605001 1352 ntBASIC5.66□□□□□ -1.5
CIITAP33076 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CIITAP33076 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CIITAP33076 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CIITAP33076 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CIITAP33076 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CIITAP33076 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CIITAP33076 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CIITAP33076 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CIITAP33076 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.5
CIITAP33076 AC006484.1-201ENST00000435086 1884 ntBASIC5.65□□□□□ -1.5
CIITAP33076 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CIITAP33076 ECM1P2-201ENST00000503354 1577 ntBASIC5.65□□□□□ -1.5
CIITAP33076 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CIITAP33076 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CIITAP33076 SNORD115-48-201ENST00000364764 76 ntBASIC5.65□□□□□ -1.5
CIITAP33076 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CIITAP33076 AF186996.5-201ENST00000418098 904 ntBASIC5.65□□□□□ -1.5
CIITAP33076 OR2AM1P-201ENST00000422137 422 ntBASIC5.65□□□□□ -1.5
CIITAP33076 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.65□□□□□ -1.5
CIITAP33076 AL590762.4-201ENST00000425885 253 ntBASIC5.65□□□□□ -1.5
CIITAP33076 MTATP6P17-201ENST00000431030 672 ntBASIC5.65□□□□□ -1.5
CIITAP33076 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.65□□□□□ -1.5
CIITAP33076 AC011242.1-201ENST00000433596 1158 ntBASIC5.65□□□□□ -1.5
CIITAP33076 AL691482.1-201ENST00000453255 87 ntBASIC5.65□□□□□ -1.5
CIITAP33076 RN7SL610P-201ENST00000463845 291 ntBASIC5.65□□□□□ -1.5
CIITAP33076 GTF2IP9-201ENST00000502460 301 ntBASIC5.65□□□□□ -1.5
CIITAP33076 TRAV31-201ENST00000502780 342 ntBASIC5.65□□□□□ -1.5
CIITAP33076 ENPP7P11-201ENST00000505915 627 ntBASIC5.65□□□□□ -1.5
CIITAP33076 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.65□□□□□ -1.5
CIITAP33076 AC103833.1-201ENST00000517442 172 ntBASIC5.65□□□□□ -1.5
CIITAP33076 OR5D15P-201ENST00000531671 942 ntBASIC5.65□□□□□ -1.5
CIITAP33076 GCSHP4-201ENST00000538792 439 ntBASIC5.65□□□□□ -1.5
CIITAP33076 CD24P2-201ENST00000565486 219 ntBASIC5.65□□□□□ -1.5
CIITAP33076 AC122134.1-201ENST00000565664 1104 ntBASIC5.65□□□□□ -1.5
CIITAP33076 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.65□□□□□ -1.5
CIITAP33076 EIF1P5-201ENST00000585002 234 ntBASIC5.65□□□□□ -1.5
CIITAP33076 MIR4443-201ENST00000585052 53 ntBASIC5.65□□□□□ -1.5
CIITAP33076 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.65□□□□□ -1.5
CIITAP33076 AL451049.1-201ENST00000608672 497 ntBASIC5.65□□□□□ -1.5
CIITAP33076 AP001521.2-201ENST00000608772 546 ntBASIC5.65□□□□□ -1.5
CIITAP33076 AC063944.3-201ENST00000609969 533 ntBASIC5.65□□□□□ -1.5
CIITAP33076 AC087385.3-201ENST00000620477 187 ntBASIC5.65□□□□□ -1.5
CIITAP33076 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.65□□□□□ -1.51
CIITAP33076 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CIITAP33076 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CIITAP33076 CASC19-261ENST00000641853 1638 ntBASIC5.65□□□□□ -1.51
CIITAP33076 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CIITAP33076 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CIITAP33076 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CIITAP33076 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.65□□□□□ -1.51
CIITAP33076 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CIITAP33076 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CIITAP33076 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CIITAP33076 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CIITAP33076 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CIITAP33076 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.64□□□□□ -1.51
CIITAP33076 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CIITAP33076 RNU6-650P-201ENST00000365658 111 ntBASIC5.64□□□□□ -1.51
CIITAP33076 SNORA70.10-201ENST00000384515 134 ntBASIC5.64□□□□□ -1.51
CIITAP33076 AC104297.1-201ENST00000393779 870 ntBASIC5.64□□□□□ -1.51
CIITAP33076 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.64□□□□□ -1.51
CIITAP33076 OR13Z1P-201ENST00000416141 834 ntBASIC5.64□□□□□ -1.51
CIITAP33076 AC092570.3-201ENST00000420113 693 ntBASIC5.64□□□□□ -1.51
CIITAP33076 RNF19BPX-201ENST00000426224 625 ntBASIC5.64□□□□□ -1.51
CIITAP33076 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CIITAP33076 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.64□□□□□ -1.51
CIITAP33076 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.64□□□□□ -1.51
CIITAP33076 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.64□□□□□ -1.51
CIITAP33076 AL513321.1-201ENST00000441175 761 ntBASIC5.64□□□□□ -1.51
CIITAP33076 RPL31P44-201ENST00000447680 377 ntBASIC5.64□□□□□ -1.51
CIITAP33076 AL157884.3-201ENST00000448273 1184 ntBASIC5.64□□□□□ -1.51
CIITAP33076 AP002345.1-201ENST00000456493 928 ntBASIC5.64□□□□□ -1.51
CIITAP33076 AC093663.2-201ENST00000484625 313 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms