Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL513175.2-201ENST00000422071 443 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 CETN4P-201ENST00000432407 469 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.4□□□□□ -1.38
CNGA1P29973 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CNGA1P29973 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.4□□□□□ -1.38
CNGA1P29973 AC073052.1-201ENST00000440417 714 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 AC009263.1-201ENST00000441193 1239 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.4□□□□□ -1.38
CNGA1P29973 HMGB3P6-201ENST00000444896 598 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 AC004022.1-201ENST00000447766 1066 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.4□□□□□ -1.38
CNGA1P29973 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.4□□□□□ -1.38
CNGA1P29973 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.4□□□□□ -1.38
CNGA1P29973 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.4□□□□□ -1.38
CNGA1P29973 NAP1L1P3-201ENST00000462291 880 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.4□□□□□ -1.38
CNGA1P29973 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.4□□□□□ -1.38
CNGA1P29973 AC010627.1-201ENST00000503819 1294 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 HPRT1P2-201ENST00000505250 544 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.4□□□□□ -1.38
CNGA1P29973 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CNGA1P29973 AC074255.1-201ENST00000511259 501 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 AC078899.1-201ENST00000521432 1185 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 AP000859.1-201ENST00000525536 307 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.4□□□□□ -1.38
CNGA1P29973 AC090424.1-201ENST00000535243 736 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CNGA1P29973 MIR4436B2-201ENST00000581415 91 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 MIR4436B1-201ENST00000583272 91 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.4□□□□□ -1.38
CNGA1P29973 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.4□□□□□ -1.38
CNGA1P29973 EIF1P6-201ENST00000600054 334 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.4□□□□□ -1.38
CNGA1P29973 AP001267.4-201ENST00000602598 545 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 AC055764.2-201ENST00000610089 670 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 RNA5SP439-201ENST00000617595 124 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 VN1R7P-201ENST00000619242 903 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.4□□□□□ -1.38
CNGA1P29973 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.4□□□□□ -1.38
CNGA1P29973 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CNGA1P29973 AC097461.1-201ENST00000568928 2821 ntBASIC6.4□□□□□ -1.38
CNGA1P29973 HSPA8P17-201ENST00000427029 1382 ntBASIC6.4□□□□□ -1.39
CNGA1P29973 MTCO1P6-201ENST00000481192 1384 ntBASIC6.4□□□□□ -1.39
CNGA1P29973 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CNGA1P29973 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.4□□□□□ -1.39
CNGA1P29973 MTCO1P7-201ENST00000419523 1542 ntBASIC6.4□□□□□ -1.39
CNGA1P29973 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CNGA1P29973 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CNGA1P29973 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CNGA1P29973 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.4□□□□□ -1.39
CNGA1P29973 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CNGA1P29973 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CNGA1P29973 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.39□□□□□ -1.39
CNGA1P29973 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CNGA1P29973 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CNGA1P29973 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.39□□□□□ -1.39
CNGA1P29973 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CNGA1P29973 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.39□□□□□ -1.39
CNGA1P29973 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CNGA1P29973 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CNGA1P29973 RNU6-1339P-201ENST00000363574 91 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 AL589647.1-201ENST00000402485 466 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.39□□□□□ -1.39
CNGA1P29973 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CNGA1P29973 AL390774.1-201ENST00000411924 246 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.39□□□□□ -1.39
CNGA1P29973 MTCO3P21-201ENST00000430791 643 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 USP24P1-201ENST00000433802 779 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 AC096775.1-201ENST00000437724 448 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.39□□□□□ -1.39
CNGA1P29973 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.39□□□□□ -1.39
CNGA1P29973 CASP3P1-201ENST00000446037 609 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 AL929288.2-201ENST00000446368 407 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 AC005002.1-201ENST00000447458 540 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.39□□□□□ -1.39
CNGA1P29973 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.39□□□□□ -1.39
CNGA1P29973 RN7SL97P-201ENST00000486780 299 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.39□□□□□ -1.39
CNGA1P29973 MTCYBP35-201ENST00000503630 1137 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC6.39□□□□□ -1.39
CNGA1P29973 snoU109.5-201ENST00000516231 132 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.39□□□□□ -1.39
CNGA1P29973 DUXAP5-201ENST00000529668 529 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 AC124293.1-201ENST00000530034 493 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.39□□□□□ -1.39
CNGA1P29973 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.39□□□□□ -1.39
CNGA1P29973 GAS5-AS1-201ENST00000602767 694 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 AC009948.4-201ENST00000604692 675 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 BNIP3P4-201ENST00000604946 565 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 AC126915.2-201ENST00000610957 190 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CNGA1P29973 uc_338.9-201ENST00000617424 182 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.39□□□□□ -1.39
CNGA1P29973 AC074140.1-201ENST00000621617 208 ntBASIC6.39□□□□□ -1.39
CNGA1P29973 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.39□□□□□ -1.39
CNGA1P29973 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.39□□□□□ -1.39
CNGA1P29973 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CNGA1P29973 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CNGA1P29973 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CNGA1P29973 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms