Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A5P29400 OR51H2P-202ENST00000641424 3046 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A5P29400 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL4A5P29400 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.34□□□□□ -1.56
COL4A5P29400 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL4A5P29400 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.34□□□□□ -1.56
COL4A5P29400 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
COL4A5P29400 RLIMP1-201ENST00000339626 1680 ntBASIC5.34□□□□□ -1.56
COL4A5P29400 MIR3065-201ENST00000390137 79 ntBASIC5.34□□□□□ -1.56
COL4A5P29400 EIF4HP2-201ENST00000424380 563 ntBASIC5.34□□□□□ -1.56
COL4A5P29400 AC245028.2-201ENST00000458673 253 ntBASIC5.34□□□□□ -1.56
COL4A5P29400 AC079804.1-201ENST00000461922 436 ntBASIC5.34□□□□□ -1.56
COL4A5P29400 RPL23AP2-201ENST00000471227 466 ntBASIC5.34□□□□□ -1.56
COL4A5P29400 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.34□□□□□ -1.56
COL4A5P29400 MTND4LP31-201ENST00000514859 294 ntBASIC5.34□□□□□ -1.56
COL4A5P29400 IGKV2-23-201ENST00000518729 323 ntBASIC5.34□□□□□ -1.56
COL4A5P29400 AC079587.1-201ENST00000603846 277 ntBASIC5.34□□□□□ -1.56
COL4A5P29400 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.34□□□□□ -1.56
COL4A5P29400 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
COL4A5P29400 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A5P29400 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
COL4A5P29400 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A5P29400 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A5P29400 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A5P29400 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A5P29400 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A5P29400 RN7SKP235-201ENST00000410662 305 ntBASIC5.33□□□□□ -1.56
COL4A5P29400 AL157831.1-201ENST00000426134 473 ntBASIC5.33□□□□□ -1.56
COL4A5P29400 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.33□□□□□ -1.56
COL4A5P29400 RPL6P5-201ENST00000445678 828 ntBASIC5.33□□□□□ -1.56
COL4A5P29400 AC020890.1-201ENST00000491837 504 ntBASIC5.33□□□□□ -1.56
COL4A5P29400 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.33□□□□□ -1.56
COL4A5P29400 AGGF1P6-201ENST00000569213 976 ntBASIC5.33□□□□□ -1.56
COL4A5P29400 AC053481.4-201ENST00000583164 216 ntBASIC5.33□□□□□ -1.56
COL4A5P29400 AL161756.2-201ENST00000604597 246 ntBASIC5.33□□□□□ -1.56
COL4A5P29400 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A5P29400 MIR6075-201ENST00000620782 95 ntBASIC5.33□□□□□ -1.56
COL4A5P29400 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A5P29400 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A5P29400 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.33□□□□□ -1.56
COL4A5P29400 DDX18P5-201ENST00000534547 1306 ntBASIC5.33□□□□□ -1.56
COL4A5P29400 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A5P29400 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL4A5P29400 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A5P29400 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.32□□□□□ -1.56
COL4A5P29400 AL590806.1-201ENST00000415818 853 ntBASIC5.32□□□□□ -1.56
COL4A5P29400 COX6B1P7-201ENST00000430845 235 ntBASIC5.32□□□□□ -1.56
COL4A5P29400 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A5P29400 BTF3P6-201ENST00000448054 499 ntBASIC5.32□□□□□ -1.56
COL4A5P29400 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.32□□□□□ -1.56
COL4A5P29400 RPL5P32-201ENST00000454085 879 ntBASIC5.32□□□□□ -1.56
COL4A5P29400 RPL7L1P8-201ENST00000469911 741 ntBASIC5.32□□□□□ -1.56
COL4A5P29400 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.32□□□□□ -1.56
COL4A5P29400 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.32□□□□□ -1.56
COL4A5P29400 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.32□□□□□ -1.56
COL4A5P29400 BPIFA4P-203ENST00000603168 689 ntBASIC5.32□□□□□ -1.56
COL4A5P29400 AC112484.5-201ENST00000624189 228 ntBASIC5.32□□□□□ -1.56
COL4A5P29400 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A5P29400 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
COL4A5P29400 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A5P29400 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A5P29400 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
COL4A5P29400 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
COL4A5P29400 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL4A5P29400 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.32□□□□□ -1.56
COL4A5P29400 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A5P29400 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.31□□□□□ -1.56
COL4A5P29400 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.31□□□□□ -1.56
COL4A5P29400 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL4A5P29400 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A5P29400 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.31□□□□□ -1.56
COL4A5P29400 SNORA11.1-201ENST00000408133 129 ntBASIC5.31□□□□□ -1.56
COL4A5P29400 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.31□□□□□ -1.56
COL4A5P29400 ARAFP1-201ENST00000422172 605 ntBASIC5.31□□□□□ -1.56
COL4A5P29400 MRPL50P1-201ENST00000431951 384 ntBASIC5.31□□□□□ -1.56
COL4A5P29400 MRPS21P3-201ENST00000436696 262 ntBASIC5.31□□□□□ -1.56
COL4A5P29400 AC026726.1-201ENST00000512859 601 ntBASIC5.31□□□□□ -1.56
COL4A5P29400 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.31□□□□□ -1.56
COL4A5P29400 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COL4A5P29400 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL4A5P29400 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A5P29400 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A5P29400 NOL8P1-201ENST00000508336 3529 ntBASIC5.31□□□□□ -1.56
COL4A5P29400 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A5P29400 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.31□□□□□ -1.56
COL4A5P29400 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A5P29400 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL4A5P29400 RN7SKP159-201ENST00000410657 292 ntBASIC5.31□□□□□ -1.56
COL4A5P29400 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.31□□□□□ -1.56
COL4A5P29400 DHX9P1-201ENST00000436565 3076 ntBASIC5.31□□□□□ -1.56
COL4A5P29400 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL4A5P29400 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.31□□□□□ -1.56
COL4A5P29400 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
COL4A5P29400 AC105233.3-201ENST00000531125 744 ntBASIC5.31□□□□□ -1.56
COL4A5P29400 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.31□□□□□ -1.56
COL4A5P29400 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.31□□□□□ -1.56
COL4A5P29400 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.31□□□□□ -1.56
COL4A5P29400 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.31□□□□□ -1.56
COL4A5P29400 AC023762.1-201ENST00000603280 584 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms