Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 Z97832.1-201ENST00000402490 328 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 HMGN2P27-201ENST00000427352 270 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 PTMAP6-201ENST00000439110 327 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AL691482.1-201ENST00000453255 87 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC093166.2-201ENST00000455969 1017 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 RPS17P2-201ENST00000461663 408 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 RPL23AP53-201ENST00000521854 457 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC012414.2-201ENST00000559474 187 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AL627230.1-201ENST00000613077 211 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC011472.4-201ENST00000615848 491 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AL591926.8-201ENST00000616876 211 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC138965.3-201ENST00000623875 498 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC104820.1-201ENST00000624183 307 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC073869.10-201ENST00000642016 354 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC017002.4-201ENST00000604721 1525 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 SNORA73.1-201ENST00000363107 205 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 SNORA70.10-201ENST00000384515 134 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 RNU6-146P-201ENST00000384602 108 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AL136116.2-201ENST00000404020 785 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 TMX2P1-201ENST00000436507 708 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 RPL34P20-201ENST00000442771 351 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 BX284632.1-201ENST00000478218 541 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AC109462.1-201ENST00000491087 368 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 UBA52P3-201ENST00000491303 382 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 RNA5SP43-201ENST00000516559 110 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 EIF1P5-201ENST00000585002 234 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 BX322635.1-201ENST00000605804 496 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AC037198.3-201ENST00000616754 526 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AC007342.8-201ENST00000623278 678 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 MAPK10-338ENST00000641647 3362 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AL445437.1-201ENST00000623157 3087 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 AC100778.3-201ENST00000580060 1750 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DPA1P20036 ECM1P2-201ENST00000503354 1577 ntBASIC5.04□□□□□ -1.6
HLA-DPA1P20036 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC068446.1-201ENST00000556425 1549 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms