Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC006065.6-201ENST00000625201 545 ntBASIC4.69□□□□□ -1.66
HMGA1P17096 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMGA1P17096 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HMGA1P17096 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMGA1P17096 TET1P1-201ENST00000426627 2301 ntBASIC4.69□□□□□ -1.66
HMGA1P17096 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HMGA1P17096 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGA1P17096 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMGA1P17096 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGA1P17096 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGA1P17096 AL449283.1-201ENST00000602631 3403 ntBASIC4.68□□□□□ -1.66
HMGA1P17096 A2MP1-204ENST00000566278 4130 ntBASIC4.68□□□□□ -1.66
HMGA1P17096 AC009951.1-201ENST00000623674 2614 ntBASIC4.68□□□□□ -1.66
HMGA1P17096 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HMGA1P17096 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
HMGA1P17096 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HMGA1P17096 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGA1P17096 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGA1P17096 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGA1P17096 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGA1P17096 AC004975.1-201ENST00000428733 208 ntBASIC4.68□□□□□ -1.66
HMGA1P17096 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGA1P17096 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGA1P17096 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGA1P17096 RPL7P33-201ENST00000444159 742 ntBASIC4.68□□□□□ -1.66
HMGA1P17096 PHBP16-201ENST00000446318 950 ntBASIC4.68□□□□□ -1.66
HMGA1P17096 AC012671.1-201ENST00000451912 203 ntBASIC4.68□□□□□ -1.66
HMGA1P17096 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGA1P17096 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGA1P17096 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGA1P17096 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.68□□□□□ -1.66
HMGA1P17096 RN7SKP21-201ENST00000516503 220 ntBASIC4.68□□□□□ -1.66
HMGA1P17096 AC138701.1-201ENST00000524329 714 ntBASIC4.68□□□□□ -1.66
HMGA1P17096 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGA1P17096 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGA1P17096 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
HMGA1P17096 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HMGA1P17096 PSMB7P1-201ENST00000556349 514 ntBASIC4.68□□□□□ -1.66
HMGA1P17096 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGA1P17096 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HMGA1P17096 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HMGA1P17096 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGA1P17096 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGA1P17096 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGA1P17096 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HMGA1P17096 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGA1P17096 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGA1P17096 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGA1P17096 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGA1P17096 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGA1P17096 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HMGA1P17096 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGA1P17096 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGA1P17096 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HMGA1P17096 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGA1P17096 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGA1P17096 AL603750.1-201ENST00000624216 1717 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGA1P17096 AC011933.1-201ENST00000413334 321 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGA1P17096 AC011998.1-201ENST00000433403 117 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 CYCSP34-201ENST00000458172 304 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 AC116533.1-201ENST00000459748 321 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 RN7SL41P-201ENST00000476144 297 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 STRADBP1-201ENST00000478954 1281 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGA1P17096 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.67□□□□□ -1.66
HMGA1P17096 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGA1P17096 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGA1P17096 CYCSP29-201ENST00000533731 318 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 TRAV8-5-201ENST00000537369 341 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.67□□□□□ -1.66
HMGA1P17096 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGA1P17096 AC090181.2-201ENST00000602975 672 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGA1P17096 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGA1P17096 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGA1P17096 AC009704.2-201ENST00000618739 483 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 AL445567.2-201ENST00000618935 498 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGA1P17096 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGA1P17096 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMGA1P17096 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGA1P17096 EIF2AP4-201ENST00000424793 1781 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 AL731532.2-201ENST00000623542 1953 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMGA1P17096 OR51H2P-202ENST00000641424 3046 ntBASIC4.67□□□□□ -1.66
HMGA1P17096 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMGA1P17096 AP000756.2-201ENST00000624168 2567 ntBASIC4.66□□□□□ -1.66
HMGA1P17096 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGA1P17096 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HMGA1P17096 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGA1P17096 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGA1P17096 AC107068.1-201ENST00000563286 4218 ntBASIC4.66□□□□□ -1.66
HMGA1P17096 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HMGA1P17096 MIR331-201ENST00000362302 94 ntBASIC4.66□□□□□ -1.66
HMGA1P17096 MIR3065-201ENST00000390137 79 ntBASIC4.66□□□□□ -1.66
HMGA1P17096 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGA1P17096 ARAFP1-201ENST00000422172 605 ntBASIC4.66□□□□□ -1.66
HMGA1P17096 OR2AH1P-201ENST00000425717 928 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms