Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MMP3P08254 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.49□□□□□ -1.53
MMP3P08254 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.49□□□□□ -1.53
MMP3P08254 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.49□□□□□ -1.53
MMP3P08254 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
MMP3P08254 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
MMP3P08254 AC126755.2-208ENST00000327792 462 ntBASIC5.49□□□□□ -1.53
MMP3P08254 AC138969.1-213ENST00000331436 462 ntBASIC5.49□□□□□ -1.53
MMP3P08254 RNA5SP453-201ENST00000362503 119 ntBASIC5.49□□□□□ -1.53
MMP3P08254 RNU6-792P-201ENST00000363490 107 ntBASIC5.49□□□□□ -1.53
MMP3P08254 SNORA72.3-201ENST00000365074 132 ntBASIC5.49□□□□□ -1.53
MMP3P08254 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MMP3P08254 NPM1P37-201ENST00000403105 874 ntBASIC5.49□□□□□ -1.53
MMP3P08254 MTATP6P31-201ENST00000406985 692 ntBASIC5.49□□□□□ -1.53
MMP3P08254 U3.32-201ENST00000408116 212 ntBASIC5.49□□□□□ -1.53
MMP3P08254 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MMP3P08254 AL356968.2-201ENST00000412769 1257 ntBASIC5.49□□□□□ -1.53
MMP3P08254 RSU1P3-201ENST00000412878 835 ntBASIC5.49□□□□□ -1.53
MMP3P08254 TBCAP2-201ENST00000416175 326 ntBASIC5.49□□□□□ -1.53
MMP3P08254 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.49□□□□□ -1.53
MMP3P08254 SFR1P2-201ENST00000421841 730 ntBASIC5.49□□□□□ -1.53
MMP3P08254 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.49□□□□□ -1.53
MMP3P08254 RPS26P4-201ENST00000431743 355 ntBASIC5.49□□□□□ -1.53
MMP3P08254 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.49□□□□□ -1.53
MMP3P08254 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.49□□□□□ -1.53
MMP3P08254 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.49□□□□□ -1.53
MMP3P08254 MTND6P5-201ENST00000448266 512 ntBASIC5.49□□□□□ -1.53
MMP3P08254 TPT1P12-201ENST00000448968 492 ntBASIC5.49□□□□□ -1.53
MMP3P08254 BUD31P2-201ENST00000449374 300 ntBASIC5.49□□□□□ -1.53
MMP3P08254 AC010326.1-201ENST00000462726 602 ntBASIC5.49□□□□□ -1.53
MMP3P08254 RPL12P20-201ENST00000475538 479 ntBASIC5.49□□□□□ -1.53
MMP3P08254 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.49□□□□□ -1.53
MMP3P08254 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.49□□□□□ -1.53
MMP3P08254 AC110760.3-202ENST00000515177 371 ntBASIC5.49□□□□□ -1.53
MMP3P08254 AC103833.1-201ENST00000517442 172 ntBASIC5.49□□□□□ -1.53
MMP3P08254 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.49□□□□□ -1.53
MMP3P08254 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.49□□□□□ -1.53
MMP3P08254 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.49□□□□□ -1.53
MMP3P08254 AC027369.5-201ENST00000533838 755 ntBASIC5.49□□□□□ -1.53
MMP3P08254 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.49□□□□□ -1.53
MMP3P08254 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.49□□□□□ -1.53
MMP3P08254 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.49□□□□□ -1.53
MMP3P08254 MIR5096-201ENST00000583713 70 ntBASIC5.49□□□□□ -1.53
MMP3P08254 AC245884.10-201ENST00000597355 337 ntBASIC5.49□□□□□ -1.53
MMP3P08254 AC098935.2-201ENST00000604222 466 ntBASIC5.49□□□□□ -1.53
MMP3P08254 AC004775.1-201ENST00000607389 753 ntBASIC5.49□□□□□ -1.53
MMP3P08254 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.49□□□□□ -1.53
MMP3P08254 AF129408.1-201ENST00000608767 431 ntBASIC5.49□□□□□ -1.53
MMP3P08254 MIR6853-201ENST00000619642 74 ntBASIC5.49□□□□□ -1.53
MMP3P08254 OR5AC4P-202ENST00000642086 985 ntBASIC5.49□□□□□ -1.53
MMP3P08254 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
MMP3P08254 Z98755.1-201ENST00000407015 1384 ntBASIC5.49□□□□□ -1.53
MMP3P08254 CR382285.2-201ENST00000624662 1495 ntBASIC5.49□□□□□ -1.53
MMP3P08254 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MMP3P08254 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
MMP3P08254 AC097063.1-201ENST00000426714 1797 ntBASIC5.49□□□□□ -1.53
MMP3P08254 AC026523.2-201ENST00000625039 7739 ntBASIC5.49□□□□□ -1.53
MMP3P08254 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MMP3P08254 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MMP3P08254 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MMP3P08254 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.49□□□□□ -1.53
MMP3P08254 MAPK10-263ENST00000641052 4307 ntBASIC5.49□□□□□ -1.53
MMP3P08254 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
MMP3P08254 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.49□□□□□ -1.53
MMP3P08254 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.49□□□□□ -1.53
MMP3P08254 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MMP3P08254 MTCO1P7-201ENST00000419523 1542 ntBASIC5.48□□□□□ -1.53
MMP3P08254 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.48□□□□□ -1.53
MMP3P08254 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.48□□□□□ -1.53
MMP3P08254 SMG1P7-201ENST00000565246 2704 ntBASIC5.48□□□□□ -1.53
MMP3P08254 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
MMP3P08254 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MMP3P08254 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
MMP3P08254 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.48□□□□□ -1.53
MMP3P08254 NCLP2-201ENST00000416078 1462 ntBASIC5.48□□□□□ -1.53
MMP3P08254 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.48□□□□□ -1.53
MMP3P08254 RNU6-609P-201ENST00000365459 107 ntBASIC5.48□□□□□ -1.53
MMP3P08254 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.48□□□□□ -1.53
MMP3P08254 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MMP3P08254 U3.30-201ENST00000391308 210 ntBASIC5.48□□□□□ -1.53
MMP3P08254 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.48□□□□□ -1.53
MMP3P08254 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.48□□□□□ -1.53
MMP3P08254 AL354868.1-201ENST00000417077 482 ntBASIC5.48□□□□□ -1.53
MMP3P08254 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.48□□□□□ -1.53
MMP3P08254 ARL2BPP3-201ENST00000421226 480 ntBASIC5.48□□□□□ -1.53
MMP3P08254 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.48□□□□□ -1.53
MMP3P08254 AC068287.1-201ENST00000430283 295 ntBASIC5.48□□□□□ -1.53
MMP3P08254 PTP4A1P3-201ENST00000433661 420 ntBASIC5.48□□□□□ -1.53
MMP3P08254 AC006326.1-201ENST00000445465 787 ntBASIC5.48□□□□□ -1.53
MMP3P08254 AC000111.2-201ENST00000448200 210 ntBASIC5.48□□□□□ -1.53
MMP3P08254 CLIC4P1-201ENST00000453177 535 ntBASIC5.48□□□□□ -1.53
MMP3P08254 RPS17P2-201ENST00000461663 408 ntBASIC5.48□□□□□ -1.53
MMP3P08254 RN7SL385P-201ENST00000468873 276 ntBASIC5.48□□□□□ -1.53
MMP3P08254 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.48□□□□□ -1.53
MMP3P08254 HPRT1P1-201ENST00000509498 657 ntBASIC5.48□□□□□ -1.53
MMP3P08254 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.48□□□□□ -1.53
MMP3P08254 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.48□□□□□ -1.53
MMP3P08254 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.48□□□□□ -1.53
MMP3P08254 AC138701.1-201ENST00000524329 714 ntBASIC5.48□□□□□ -1.53
MMP3P08254 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms