Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL352984.2-202ENST00000613699 155 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SPTA1P02549 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SPTA1P02549 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.29□□□□□ -1.72
SPTA1P02549 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SPTA1P02549 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SPTA1P02549 AC090017.1-201ENST00000548612 1779 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SPTA1P02549 SNORA48.4-201ENST00000391089 134 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 RN7SKP16-201ENST00000410180 299 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.29□□□□□ -1.72
SPTA1P02549 ARAFP2-201ENST00000440565 559 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 AC041039.1-201ENST00000485656 536 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC4.29□□□□□ -1.72
SPTA1P02549 PSMB7P1-201ENST00000556349 514 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 AC022726.1-201ENST00000587475 207 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.29□□□□□ -1.72
SPTA1P02549 AC007179.3-201ENST00000604976 235 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.29□□□□□ -1.72
SPTA1P02549 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SPTA1P02549 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPTA1P02549 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SPTA1P02549 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SPTA1P02549 RNU6-1279P-201ENST00000383917 103 ntBASIC4.28□□□□□ -1.72
SPTA1P02549 MIR491-201ENST00000384877 84 ntBASIC4.28□□□□□ -1.72
SPTA1P02549 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.28□□□□□ -1.72
SPTA1P02549 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.28□□□□□ -1.72
SPTA1P02549 RPL7AP25-201ENST00000423357 805 ntBASIC4.28□□□□□ -1.72
SPTA1P02549 AC090804.1-201ENST00000448870 490 ntBASIC4.28□□□□□ -1.72
SPTA1P02549 AC108475.1-201ENST00000507880 950 ntBASIC4.28□□□□□ -1.72
SPTA1P02549 AC130364.2-201ENST00000528639 604 ntBASIC4.28□□□□□ -1.72
SPTA1P02549 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.28□□□□□ -1.72
SPTA1P02549 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.28□□□□□ -1.72
SPTA1P02549 AC006116.5-201ENST00000591936 559 ntBASIC4.28□□□□□ -1.72
SPTA1P02549 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.28□□□□□ -1.72
SPTA1P02549 AC069542.2-201ENST00000624816 216 ntBASIC4.28□□□□□ -1.72
SPTA1P02549 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SPTA1P02549 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPTA1P02549 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SPTA1P02549 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SPTA1P02549 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.73
SPTA1P02549 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.28□□□□□ -1.73
SPTA1P02549 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SPTA1P02549 U3.32-201ENST00000408116 212 ntBASIC4.27□□□□□ -1.73
SPTA1P02549 RN7SKP267-201ENST00000410381 285 ntBASIC4.27□□□□□ -1.73
SPTA1P02549 AL117339.2-201ENST00000430475 180 ntBASIC4.27□□□□□ -1.73
SPTA1P02549 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.27□□□□□ -1.73
SPTA1P02549 AL132838.2-201ENST00000492041 314 ntBASIC4.27□□□□□ -1.73
SPTA1P02549 RN7SL810P-201ENST00000493031 276 ntBASIC4.27□□□□□ -1.73
SPTA1P02549 RNU1-6P-201ENST00000516290 144 ntBASIC4.27□□□□□ -1.73
SPTA1P02549 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.27□□□□□ -1.73
SPTA1P02549 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.27□□□□□ -1.73
SPTA1P02549 AC004656.1-201ENST00000568479 4951 ntBASIC4.27□□□□□ -1.73
SPTA1P02549 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SPTA1P02549 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.27□□□□□ -1.73
SPTA1P02549 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SPTA1P02549 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.27□□□□□ -1.73
SPTA1P02549 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SPTA1P02549 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SPTA1P02549 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SPTA1P02549 RNU1-82P-201ENST00000390851 165 ntBASIC4.27□□□□□ -1.73
SPTA1P02549 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SPTA1P02549 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.27□□□□□ -1.73
SPTA1P02549 FTH1P21-201ENST00000512179 511 ntBASIC4.27□□□□□ -1.73
SPTA1P02549 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.27□□□□□ -1.73
SPTA1P02549 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SPTA1P02549 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.27□□□□□ -1.73
SPTA1P02549 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.27□□□□□ -1.73
SPTA1P02549 AC053481.4-201ENST00000583164 216 ntBASIC4.27□□□□□ -1.73
SPTA1P02549 MIR8059-201ENST00000620427 81 ntBASIC4.27□□□□□ -1.73
SPTA1P02549 AC090506.2-201ENST00000624521 419 ntBASIC4.27□□□□□ -1.73
SPTA1P02549 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SPTA1P02549 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SPTA1P02549 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SPTA1P02549 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.27□□□□□ -1.73
SPTA1P02549 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.27□□□□□ -1.73
SPTA1P02549 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SPTA1P02549 RNU1-59P-201ENST00000364829 162 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 MIR200C-201ENST00000384980 68 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 OR1F12-201ENST00000402365 945 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.26□□□□□ -1.73
SPTA1P02549 AC097523.2-201ENST00000435551 652 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SPTA1P02549 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.26□□□□□ -1.73
SPTA1P02549 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.26□□□□□ -1.73
SPTA1P02549 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SPTA1P02549 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.26□□□□□ -1.73
SPTA1P02549 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SPTA1P02549 AC010547.7-201ENST00000570323 333 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 AP001357.1-201ENST00000586304 1053 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.26□□□□□ -1.73
SPTA1P02549 U1.25-201ENST00000614085 162 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 AL138721.1-201ENST00000616756 179 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 U1.34-201ENST00000618578 162 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 U1.31-201ENST00000620022 160 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SPTA1P02549 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SPTA1P02549 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.26□□□□□ -1.73
SPTA1P02549 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms