Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-2O95096 AL935212.3-201ENST00000450729 284 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-2O95096 AC005229.2-201ENST00000456995 399 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 RPL23AP12-201ENST00000467573 473 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 RPS4XP6-201ENST00000477670 797 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 AL049874.2-201ENST00000492636 288 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 TRAV31-201ENST00000502780 342 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.85□□□□□ -1.63
NKX2-2O95096 PGAM1P13-201ENST00000507497 754 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 AC012400.1-201ENST00000518452 381 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-2O95096 AC083923.1-201ENST00000523708 376 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-2O95096 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-2O95096 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-2O95096 AC022884.2-201ENST00000578535 580 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-2O95096 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-2O95096 VN1R87P-201ENST00000596706 487 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-2O95096 AC017076.1-201ENST00000607613 578 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 AL121652.1-201ENST00000608851 448 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 AC091046.2-201ENST00000620775 665 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 AC024595.1-201ENST00000623088 387 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 LINC01808-202ENST00000641680 1116 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-2O95096 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
NKX2-2O95096 AC004158.1-201ENST00000564508 4319 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-2O95096 AL137100.1-201ENST00000556703 1620 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-2O95096 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
NKX2-2O95096 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-2O95096 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NKX2-2O95096 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-2O95096 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-2O95096 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-2O95096 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
NKX2-2O95096 AC092376.2-201ENST00000622621 4116 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-2O95096 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.84□□□□□ -1.63
NKX2-2O95096 TTC39DP-201ENST00000416781 1688 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
NKX2-2O95096 AC006042.3-201ENST00000454684 1469 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-2O95096 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-2O95096 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.84□□□□□ -1.63
NKX2-2O95096 AC096656.1-201ENST00000623826 1364 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 RN7SKP186-201ENST00000365371 303 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-2O95096 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NKX2-2O95096 DNAJC19P6-201ENST00000401853 280 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 NUDT19P3-201ENST00000404698 555 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 NPM1P4-201ENST00000414095 812 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 SFR1P2-201ENST00000421841 730 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.84□□□□□ -1.63
NKX2-2O95096 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.84□□□□□ -1.63
NKX2-2O95096 AC009238.2-201ENST00000431026 355 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-2O95096 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.84□□□□□ -1.63
NKX2-2O95096 AC016724.1-201ENST00000453215 421 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 AC108161.1-201ENST00000461060 402 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 RPL7P39-201ENST00000481157 744 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 EIF3LP3-201ENST00000495197 822 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-2O95096 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.84□□□□□ -1.63
NKX2-2O95096 AC106872.4-201ENST00000510050 523 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.84□□□□□ -1.63
NKX2-2O95096 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 AL049779.2-201ENST00000553847 315 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 AL121594.4-201ENST00000556211 1196 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 AC068714.1-201ENST00000559623 800 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.84□□□□□ -1.63
NKX2-2O95096 AC095057.3-201ENST00000567102 1157 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 MIR4760-201ENST00000585040 80 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 IMMP1LP3-201ENST00000604197 224 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.84□□□□□ -1.63
NKX2-2O95096 AC109309.2-201ENST00000612597 332 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.84□□□□□ -1.63
NKX2-2O95096 AC135068.12-201ENST00000637370 931 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 MIR4302-201ENST00000638058 60 ntBASIC4.84□□□□□ -1.63
NKX2-2O95096 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-2O95096 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-2O95096 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
NKX2-2O95096 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NKX2-2O95096 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.84□□□□□ -1.64
NKX2-2O95096 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NKX2-2O95096 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.84□□□□□ -1.64
NKX2-2O95096 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NKX2-2O95096 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
NKX2-2O95096 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
NKX2-2O95096 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NKX2-2O95096 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-2O95096 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-2O95096 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.83□□□□□ -1.64
NKX2-2O95096 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-2O95096 AL138820.1-201ENST00000617901 5305 ntBASIC4.83□□□□□ -1.64
NKX2-2O95096 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-2O95096 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms