Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SHOX2O60902 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.72□□□□□ -1.65
SHOX2O60902 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SHOX2O60902 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SHOX2O60902 AC018555.1-201ENST00000567548 1980 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.71□□□□□ -1.66
SHOX2O60902 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SHOX2O60902 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.71□□□□□ -1.66
SHOX2O60902 RNU1-44P-201ENST00000384453 163 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHOX2O60902 AL356967.1-201ENST00000406305 431 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 RPL35AP24-201ENST00000413846 330 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 TBCAP2-201ENST00000416175 326 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.71□□□□□ -1.66
SHOX2O60902 RPSAP41-201ENST00000439695 860 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 THAP12P8-201ENST00000447914 2115 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.71□□□□□ -1.66
SHOX2O60902 RPS21P4-201ENST00000487122 248 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.71□□□□□ -1.66
SHOX2O60902 AC126177.5-201ENST00000549599 178 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.71□□□□□ -1.66
SHOX2O60902 AC022404.1-201ENST00000555320 273 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 AL049839.1-201ENST00000556151 657 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 AC044860.2-201ENST00000561005 179 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.71□□□□□ -1.66
SHOX2O60902 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.71□□□□□ -1.66
SHOX2O60902 RNA5SP440-201ENST00000612665 119 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 AL138721.1-201ENST00000616756 179 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 AC019206.1-201ENST00000621938 425 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.71□□□□□ -1.66
SHOX2O60902 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHOX2O60902 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
SHOX2O60902 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.71□□□□□ -1.66
SHOX2O60902 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.71□□□□□ -1.66
SHOX2O60902 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.71□□□□□ -1.66
SHOX2O60902 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SHOX2O60902 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.71□□□□□ -1.66
SHOX2O60902 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHOX2O60902 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.71□□□□□ -1.66
SHOX2O60902 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.7□□□□□ -1.66
SHOX2O60902 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
SHOX2O60902 AC112255.1-201ENST00000624070 2493 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHOX2O60902 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.7□□□□□ -1.66
SHOX2O60902 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
SHOX2O60902 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
SHOX2O60902 RNU1-15P-201ENST00000353977 144 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 MIR600-201ENST00000385007 98 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 SPTLC1P2-201ENST00000407089 121 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 SNORA79B-201ENST00000410557 148 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 GLUD1P9-201ENST00000420997 1173 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SHOX2O60902 AL034379.1-201ENST00000423216 253 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 CENPIP1-201ENST00000425713 902 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 AC073335.1-201ENST00000427776 363 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 EIF2S2P3-201ENST00000428356 999 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 RPS17P8-201ENST00000434525 335 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.7□□□□□ -1.66
SHOX2O60902 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 AL133445.1-201ENST00000467051 452 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 RN7SL97P-201ENST00000486780 299 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 AC093267.1-201ENST00000489176 961 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 AC015864.1-201ENST00000496512 544 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.7□□□□□ -1.66
SHOX2O60902 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.7□□□□□ -1.66
SHOX2O60902 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.7□□□□□ -1.66
SHOX2O60902 AL358913.1-201ENST00000554342 121 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.7□□□□□ -1.66
SHOX2O60902 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.7□□□□□ -1.66
SHOX2O60902 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.7□□□□□ -1.66
SHOX2O60902 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.7□□□□□ -1.66
SHOX2O60902 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.7□□□□□ -1.66
SHOX2O60902 MIR6810-201ENST00000622701 70 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.7□□□□□ -1.66
SHOX2O60902 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHOX2O60902 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SHOX2O60902 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.7□□□□□ -1.66
SHOX2O60902 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHOX2O60902 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHOX2O60902 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHOX2O60902 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.7□□□□□ -1.66
SHOX2O60902 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHOX2O60902 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.7□□□□□ -1.66
SHOX2O60902 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHOX2O60902 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHOX2O60902 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHOX2O60902 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SHOX2O60902 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.69□□□□□ -1.66
SHOX2O60902 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHOX2O60902 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHOX2O60902 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SHOX2O60902 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SHOX2O60902 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
SHOX2O60902 HMGB3P7-201ENST00000400214 611 ntBASIC4.69□□□□□ -1.66
SHOX2O60902 RN7SKP293-201ENST00000411389 296 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms