Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TO15178 RNU6-666P-201ENST00000363499 107 ntBASIC4.84□□□□□ -1.63
TO15178 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.84□□□□□ -1.63
TO15178 AC019155.1-201ENST00000382242 574 ntBASIC4.84□□□□□ -1.63
TO15178 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TO15178 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.84□□□□□ -1.63
TO15178 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.84□□□□□ -1.63
TO15178 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.84□□□□□ -1.63
TO15178 RPS4XP16-201ENST00000427198 791 ntBASIC4.84□□□□□ -1.63
TO15178 MRPL50P1-201ENST00000431951 384 ntBASIC4.84□□□□□ -1.63
TO15178 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.84□□□□□ -1.63
TO15178 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.84□□□□□ -1.63
TO15178 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.84□□□□□ -1.63
TO15178 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.84□□□□□ -1.63
TO15178 GAPDHP58-201ENST00000438477 1006 ntBASIC4.84□□□□□ -1.63
TO15178 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.84□□□□□ -1.63
TO15178 RPL6P5-201ENST00000445678 828 ntBASIC4.84□□□□□ -1.63
TO15178 GXYLT1P1-201ENST00000446657 490 ntBASIC4.84□□□□□ -1.63
TO15178 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.84□□□□□ -1.63
TO15178 TPT1P1-201ENST00000458495 518 ntBASIC4.84□□□□□ -1.63
TO15178 RN7SL172P-201ENST00000460535 303 ntBASIC4.84□□□□□ -1.63
TO15178 AP000942.1-201ENST00000463969 747 ntBASIC4.84□□□□□ -1.63
TO15178 RPS4XP1-201ENST00000482189 787 ntBASIC4.84□□□□□ -1.63
TO15178 RN7SL30P-201ENST00000488416 306 ntBASIC4.84□□□□□ -1.63
TO15178 RN7SL346P-201ENST00000491561 294 ntBASIC4.84□□□□□ -1.63
TO15178 AC016559.2-201ENST00000510759 359 ntBASIC4.84□□□□□ -1.63
TO15178 GTF2F2P1-201ENST00000511083 675 ntBASIC4.84□□□□□ -1.63
TO15178 BUD31P1-201ENST00000521828 359 ntBASIC4.84□□□□□ -1.63
TO15178 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.84□□□□□ -1.63
TO15178 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.84□□□□□ -1.63
TO15178 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.84□□□□□ -1.63
TO15178 AC024940.3-201ENST00000538551 316 ntBASIC4.84□□□□□ -1.63
TO15178 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TO15178 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TO15178 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.84□□□□□ -1.63
TO15178 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.84□□□□□ -1.63
TO15178 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.84□□□□□ -1.63
TO15178 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.84□□□□□ -1.63
TO15178 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TO15178 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TO15178 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.84□□□□□ -1.63
TO15178 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.84□□□□□ -1.63
TO15178 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.84□□□□□ -1.63
TO15178 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.84□□□□□ -1.63
TO15178 AL391834.1-201ENST00000609609 560 ntBASIC4.84□□□□□ -1.63
TO15178 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.84□□□□□ -1.63
TO15178 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.84□□□□□ -1.63
TO15178 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.84□□□□□ -1.63
TO15178 MIR6826-201ENST00000617808 98 ntBASIC4.84□□□□□ -1.63
TO15178 AC022306.3-201ENST00000619930 550 ntBASIC4.84□□□□□ -1.63
TO15178 AL049777.1-201ENST00000622740 518 ntBASIC4.84□□□□□ -1.63
TO15178 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.84□□□□□ -1.63
TO15178 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.84□□□□□ -1.63
TO15178 AC135068.12-201ENST00000637370 931 ntBASIC4.84□□□□□ -1.63
TO15178 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TO15178 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
TO15178 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TO15178 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TO15178 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TO15178 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.83□□□□□ -1.64
TO15178 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.83□□□□□ -1.64
TO15178 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 AC011493.1-201ENST00000596753 1632 ntBASIC4.83□□□□□ -1.64
TO15178 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.83□□□□□ -1.64
TO15178 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TO15178 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TO15178 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.83□□□□□ -1.64
TO15178 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.83□□□□□ -1.64
TO15178 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
TO15178 RNA5SP90-201ENST00000364801 99 ntBASIC4.83□□□□□ -1.64
TO15178 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.83□□□□□ -1.64
TO15178 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 RNU6-532P-201ENST00000384318 107 ntBASIC4.83□□□□□ -1.64
TO15178 MIR223-201ENST00000385204 110 ntBASIC4.83□□□□□ -1.64
TO15178 MIR323B-201ENST00000385269 82 ntBASIC4.83□□□□□ -1.64
TO15178 MIR1182-201ENST00000408363 97 ntBASIC4.83□□□□□ -1.64
TO15178 RNA5SP498-201ENST00000411342 120 ntBASIC4.83□□□□□ -1.64
TO15178 EIF4A1P3-201ENST00000411521 244 ntBASIC4.83□□□□□ -1.64
TO15178 AC069282.1-201ENST00000411911 526 ntBASIC4.83□□□□□ -1.64
TO15178 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.83□□□□□ -1.64
TO15178 AL158073.1-201ENST00000426848 1104 ntBASIC4.83□□□□□ -1.64
TO15178 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.83□□□□□ -1.64
TO15178 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.83□□□□□ -1.64
TO15178 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.83□□□□□ -1.64
TO15178 CNOT7P2-201ENST00000441051 832 ntBASIC4.83□□□□□ -1.64
TO15178 AC245047.2-201ENST00000441060 530 ntBASIC4.83□□□□□ -1.64
TO15178 RNF2P1-201ENST00000442955 1010 ntBASIC4.83□□□□□ -1.64
TO15178 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.83□□□□□ -1.64
TO15178 RN7SL189P-201ENST00000468631 289 ntBASIC4.83□□□□□ -1.64
TO15178 UBA52P3-201ENST00000491303 382 ntBASIC4.83□□□□□ -1.64
TO15178 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.83□□□□□ -1.64
TO15178 EIF3KP3-201ENST00000514461 639 ntBASIC4.83□□□□□ -1.64
TO15178 AC112198.4-201ENST00000515450 351 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms