Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.38□□□□□ -1.71
UPK1AO00322 AL160275.2-201ENST00000412010 394 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 RPL21P43-201ENST00000425440 472 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AC097523.2-201ENST00000435551 652 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AL450263.2-201ENST00000439400 589 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AC073587.1-201ENST00000447093 876 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 RPS3AP53-201ENST00000454716 778 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AC090142.1-201ENST00000465776 462 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AC093270.2-201ENST00000486157 792 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AC025164.1-201ENST00000496249 478 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.38□□□□□ -1.71
UPK1AO00322 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.38□□□□□ -1.71
UPK1AO00322 RN7SKP276-201ENST00000516242 268 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 RN7SKP5-201ENST00000517045 272 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AC090151.1-201ENST00000520784 730 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.38□□□□□ -1.71
UPK1AO00322 SOX5P1-201ENST00000524155 1127 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 PCNPP1-201ENST00000552501 511 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 MTND6P33-201ENST00000571794 183 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AC027455.1-201ENST00000574104 594 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 MIR3934-201ENST00000579806 107 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.38□□□□□ -1.71
UPK1AO00322 MIR4737-201ENST00000583979 81 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.38□□□□□ -1.71
UPK1AO00322 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.38□□□□□ -1.71
UPK1AO00322 AL512782.1-201ENST00000603093 364 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AL391358.1-201ENST00000605342 190 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 OR7A19P-201ENST00000608051 733 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 SNX18P1Y-201ENST00000616231 511 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AC023509.5-201ENST00000617434 807 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 AL445528.2-201ENST00000620582 470 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
UPK1AO00322 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.38□□□□□ -1.71
UPK1AO00322 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1AO00322 CASC19-222ENST00000641321 1173 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.38□□□□□ -1.71
UPK1AO00322 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
UPK1AO00322 OR51H2P-202ENST00000641424 3046 ntBASIC4.38□□□□□ -1.71
UPK1AO00322 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1AO00322 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.38□□□□□ -1.71
UPK1AO00322 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1AO00322 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1AO00322 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1AO00322 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1AO00322 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.38□□□□□ -1.71
UPK1AO00322 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1AO00322 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1AO00322 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
UPK1AO00322 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.37□□□□□ -1.71
UPK1AO00322 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1AO00322 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.37□□□□□ -1.71
UPK1AO00322 AC068254.2-201ENST00000623938 3577 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.37□□□□□ -1.71
UPK1AO00322 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1AO00322 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1AO00322 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.37□□□□□ -1.71
UPK1AO00322 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
UPK1AO00322 BX510359.2-201ENST00000417920 305 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.37□□□□□ -1.71
UPK1AO00322 AC104837.2-201ENST00000427236 424 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.37□□□□□ -1.71
UPK1AO00322 RPL21P91-201ENST00000429231 479 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 AC005154.2-201ENST00000438110 379 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 RPL12P3-201ENST00000440080 396 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 H2AFZP5-201ENST00000446960 382 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 AC108463.1-201ENST00000450258 347 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 AC091685.2-201ENST00000454924 864 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 AC104849.1-201ENST00000462623 405 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 AC090013.1-201ENST00000485147 480 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1AO00322 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.37□□□□□ -1.71
UPK1AO00322 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.37□□□□□ -1.71
UPK1AO00322 BRD9P1-201ENST00000529855 560 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.37□□□□□ -1.71
UPK1AO00322 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.37□□□□□ -1.71
UPK1AO00322 AC105129.1-201ENST00000560250 297 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.37□□□□□ -1.71
UPK1AO00322 RN7SL652P-201ENST00000577769 300 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.37□□□□□ -1.71
UPK1AO00322 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
UPK1AO00322 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.37□□□□□ -1.71
UPK1AO00322 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.37□□□□□ -1.71
UPK1AO00322 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.37□□□□□ -1.71
UPK1AO00322 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
UPK1AO00322 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1AO00322 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1AO00322 MAPK10-303ENST00000641324 3959 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
UPK1AO00322 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
UPK1AO00322 AL355852.1-201ENST00000454081 1771 ntBASIC4.37□□□□□ -1.71
UPK1AO00322 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1AO00322 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1AO00322 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1AO00322 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.36□□□□□ -1.71
UPK1AO00322 DDX18P6-201ENST00000450119 1997 ntBASIC4.36□□□□□ -1.71
UPK1AO00322 MAPK10-304ENST00000641341 3984 ntBASIC4.36□□□□□ -1.71
UPK1AO00322 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPK1AO00322 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
UPK1AO00322 GAPDHP15-201ENST00000398586 975 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms