Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AL513523.1-201ENST00000417868 1309 ntBASIC7.74□□□□□ -1.17
RCCD1A6NED2 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.74□□□□□ -1.17
RCCD1A6NED2 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.74□□□□□ -1.17
RCCD1A6NED2 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RCCD1A6NED2 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 DLD-205ENST00000440410 1993 ntTSL 2 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 HDAC1P2-201ENST00000453661 1398 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 SALL4P7-201ENST00000555779 3120 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 AC119744.1-201ENST00000454746 1715 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 KYNUP1-201ENST00000466683 1406 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 AL590290.1-201ENST00000405336 380 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 RNU4-14P-201ENST00000410858 122 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 FAM103A2P-201ENST00000444122 354 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 AC079781.2-201ENST00000446424 169 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 RNU7-27P-201ENST00000459281 62 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 AC010655.3-201ENST00000478818 450 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 OR51A1P-201ENST00000511110 946 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 AC090572.1-201ENST00000519251 160 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 MRPS16P1-201ENST00000523462 412 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 SRMP2-201ENST00000553832 916 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 MYL12BP1-201ENST00000569826 507 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 SNORD39.2-201ENST00000579995 76 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 MIR3118-1-201ENST00000581787 76 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 RN7SL664P-201ENST00000584239 305 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 AC090699.1-201ENST00000586264 321 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 ASNSP3-201ENST00000451989 1306 ntBASIC7.73□□□□□ -1.17
RCCD1A6NED2 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RCCD1A6NED2 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
RCCD1A6NED2 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RCCD1A6NED2 AC123769.2-201ENST00000624332 5984 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RCCD1A6NED2 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RCCD1A6NED2 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RCCD1A6NED2 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RCCD1A6NED2 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RCCD1A6NED2 KARSP2-201ENST00000415696 1639 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RCCD1A6NED2 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RCCD1A6NED2 RNU4-1-201ENST00000363925 141 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 Y_RNA.301-201ENST00000364990 103 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 MDM4-202ENST00000367180 547 ntTSL 3 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 MIR1-2-201ENST00000384961 85 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 HMGN2P24-201ENST00000433516 273 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 AC244505.2-201ENST00000435089 759 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 AL451074.4-201ENST00000447545 470 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 HMGB3P22-202ENST00000451823 572 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 APOOP2-201ENST00000461561 539 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RCCD1A6NED2 OR4D12P-201ENST00000509361 911 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 IGLV10-67-201ENST00000519446 325 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 MIR4680-201ENST00000580906 66 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC7.72□□□□□ -1.17
RCCD1A6NED2 AC129492.5-201ENST00000603489 315 ntBASIC7.72□□□□□ -1.17
RCCD1A6NED2 AC245389.1-201ENST00000605141 529 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms