Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RN7SL814P-201ENST00000487715 300 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 MTCO1P31-201ENST00000506355 492 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 BTG4P1-201ENST00000510421 183 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 FABP5P6-201ENST00000510588 409 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 MTATP6P15-201ENST00000527233 835 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AC118942.1-201ENST00000529674 1035 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AP000648.1-201ENST00000529682 397 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 OR8G3P-201ENST00000533406 921 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AC023825.1-201ENST00000566704 1030 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 MIR4509-3-201ENST00000578671 94 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 MIR4509-2-201ENST00000583920 94 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AL031601.1-201ENST00000605702 394 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AC026741.1-201ENST00000605892 482 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 MIR4509-1-201ENST00000618224 94 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AP003400.3-201ENST00000624904 346 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AC017104.5-201ENST00000637647 639 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 NEPNP-201ENST00000404786 1371 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 SMG1P4-204ENST00000523028 4131 ntBASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGB1Q9Y5G3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 CUL4AP1-201ENST00000514750 1863 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 OR55B1P-203ENST00000641518 2602 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 RN7SKP28-201ENST00000364770 305 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 RN7SKP153-201ENST00000365026 316 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 DBIP1-201ENST00000401435 260 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AL592310.1-201ENST00000414330 671 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AL158050.1-201ENST00000416077 457 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AC096644.3-201ENST00000416788 338 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 RNF19BPX-201ENST00000426224 625 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 BX323845.3-201ENST00000428215 527 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 MTCO1P45-201ENST00000431457 267 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 RPS26P4-201ENST00000431743 355 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 RPL12P17-201ENST00000432393 498 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 MTND2P21-201ENST00000436242 1042 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AC006335.2-201ENST00000437993 330 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AL163193.1-201ENST00000444895 788 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AL589765.3-201ENST00000446084 462 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 EIF2S2P2-201ENST00000447161 982 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 Z99714.1-201ENST00000450463 807 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 RPS27AP2-201ENST00000457576 465 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 RPL7AP10-201ENST00000481016 791 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 RFPL4AP5-201ENST00000514977 504 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AC105031.1-201ENST00000518550 476 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AP001207.2-201ENST00000519490 539 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 AC093014.1-201ENST00000548926 724 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 DUX4L52-201ENST00000549363 777 ntBASIC4.88□□□□□ -1.63
PCDHGB1Q9Y5G3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms