Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 U3.30-201ENST00000391308 210 ntBASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 RNU2-50P-201ENST00000410494 143 ntBASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 AC005154.2-201ENST00000438110 379 ntBASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 RN7SL738P-201ENST00000470264 297 ntBASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 AC011005.3-201ENST00000491624 395 ntBASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 BTG4P1-201ENST00000510421 183 ntBASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 RN7SKP46-201ENST00000515942 234 ntBASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 RPL23AP53-201ENST00000521854 457 ntBASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 SOX5P1-201ENST00000524155 1127 ntBASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 AP006289.1-201ENST00000538089 277 ntBASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 MIR6780A-201ENST00000615089 68 ntBASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 MIR192-201ENST00000384915 110 ntBASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 RSU1P3-201ENST00000412878 835 ntBASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 AC114755.2-201ENST00000413520 361 ntBASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 H2AFZP6-201ENST00000444403 394 ntBASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 AC073264.2-201ENST00000448886 166 ntBASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 GYG1P1-201ENST00000460864 698 ntBASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 AC006967.1-201ENST00000467608 589 ntBASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 AP002981.1-201ENST00000517692 975 ntBASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 AC022726.1-201ENST00000587475 207 ntBASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 MIR6853-201ENST00000619642 74 ntBASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 MAPK10-263ENST00000641052 4307 ntBASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLIP2Q9UDT6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AC079741.1-201ENST00000321498 212 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 RNA5SP505-201ENST00000364748 108 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 RNU6-398P-201ENST00000384143 109 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 RPS16P5-201ENST00000406501 404 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 RN7SKP247-201ENST00000411094 308 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AC011753.3-201ENST00000443436 406 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AL513533.1-201ENST00000453728 415 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 RPS5P7-201ENST00000456664 608 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AC112206.1-201ENST00000468416 477 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 RPL23AP72-201ENST00000492447 435 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AC073358.1-201ENST00000505671 684 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AC133555.2-201ENST00000550213 292 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms