Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 OR7H2P-201ENST00000513483 306 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 AC006427.1-201ENST00000514359 712 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 OR7E128P-201ENST00000532736 1024 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 OSBPL9P3-201ENST00000534523 595 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 BNIP3P1-201ENST00000547295 580 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 SETP1-201ENST00000556014 845 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 AC015911.5-201ENST00000587076 451 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 ZNF92P2-201ENST00000600543 1059 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 MEMO1P5-201ENST00000604810 406 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 OR8G7P-201ENST00000616658 848 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 AC016957.2-201ENST00000616998 848 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 AC022306.3-201ENST00000619930 550 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 AP006248.3-201ENST00000623580 594 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC132825.1-201ENST00000463573 2247 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 RAD1P1-201ENST00000231383 813 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 SNORA48.4-201ENST00000391089 134 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 RN7SKP16-201ENST00000410180 299 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 PRPF38AP2-201ENST00000438179 851 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC006463.2-201ENST00000473326 348 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC093890.1-201ENST00000502554 540 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 MTCO2P9-201ENST00000503214 694 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 COX6B1P5-201ENST00000509843 249 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 GSTP1P1-201ENST00000548078 319 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC005242.1-201ENST00000585658 438 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 BNIP3P31-201ENST00000604515 566 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC026790.2-201ENST00000606282 430 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC110792.4-201ENST00000609843 298 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC245389.2-201ENST00000616023 576 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC242843.1-201ENST00000618702 573 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AL163051.2-201ENST00000618976 735 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 MIR6810-201ENST00000622701 70 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC079298.1-201ENST00000625026 1619 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 MTND4P9-201ENST00000507819 1346 ntBASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HDAC6Q9UBN7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HDAC6Q9UBN7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
HDAC6Q9UBN7 SMG1P7-201ENST00000565246 2704 ntBASIC5.71□□□□□ -1.49
HDAC6Q9UBN7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HDAC6Q9UBN7 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HDAC6Q9UBN7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.71□□□□□ -1.5
HDAC6Q9UBN7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.71□□□□□ -1.5
HDAC6Q9UBN7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms