Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 UQCRBP1-201ENST00000421129 336 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 AP001324.1-201ENST00000428553 399 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 AC069061.3-201ENST00000582254 823 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 BX323046.1-201ENST00000610145 535 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 AL133243.1-201ENST00000614487 366 ntBASIC4.84□□□□□ -1.63
CISHQ9NSE2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CISHQ9NSE2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CISHQ9NSE2 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CISHQ9NSE2 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.84□□□□□ -1.63
CISHQ9NSE2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CISHQ9NSE2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CISHQ9NSE2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CISHQ9NSE2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.84□□□□□ -1.64
CISHQ9NSE2 AP001284.1-201ENST00000528393 2118 ntBASIC4.84□□□□□ -1.64
CISHQ9NSE2 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CISHQ9NSE2 AL132640.2-201ENST00000559968 1698 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 UGT2B26P-201ENST00000508672 1613 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CISHQ9NSE2 A2MP1-204ENST00000566278 4130 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CISHQ9NSE2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CISHQ9NSE2 MIR192-201ENST00000384915 110 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 FCF1P5-201ENST00000406490 482 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 AC006065.1-201ENST00000422539 802 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 PPIAP13-201ENST00000434706 478 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 AL138878.2-201ENST00000440581 1241 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 ARL2BPP10-201ENST00000446487 531 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 RN7SL346P-201ENST00000491561 294 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CISHQ9NSE2 OR5AN2P-201ENST00000534535 896 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 AC090181.2-201ENST00000602975 672 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 BPIFA4P-203ENST00000603168 689 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 AC005086.4-201ENST00000623065 213 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 MAPK10-303ENST00000641324 3959 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 AC097063.1-201ENST00000426714 1797 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CISHQ9NSE2 AL603750.1-201ENST00000624216 1717 ntBASIC4.83□□□□□ -1.64
CISHQ9NSE2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.83□□□□□ -1.64
CISHQ9NSE2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CISHQ9NSE2 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 MAPK10-286ENST00000641208 8747 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CISHQ9NSE2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 MTND5P12-201ENST00000502851 1449 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CISHQ9NSE2 Z98755.1-201ENST00000407015 1384 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 AC139769.1-204ENST00000472297 1931 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CISHQ9NSE2 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CISHQ9NSE2 AC016769.2-201ENST00000414815 475 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 RPEP3-201ENST00000425462 676 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 RPL23AP43-201ENST00000446445 471 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CISHQ9NSE2 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 RPS29P33-201ENST00000456717 146 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 AC111000.3-201ENST00000508057 576 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 AC084783.1-201ENST00000565846 910 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 AC008782.1-201ENST00000603386 430 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 AC103792.1-201ENST00000603591 919 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 OR2L1P-202ENST00000641567 1023 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 LINC01808-202ENST00000641680 1116 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.82□□□□□ -1.64
CISHQ9NSE2 AL592148.3-201ENST00000608771 2646 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CISHQ9NSE2 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms