Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 HMGB1P10-201ENST00000395823 563 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AP002784.2-201ENST00000397300 549 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 MTCYBP7-201ENST00000419540 1134 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC124944.2-201ENST00000429866 1242 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 CNOT7P2-201ENST00000441051 832 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AL358794.1-201ENST00000445689 381 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AL157827.1-201ENST00000447622 132 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 OR52E3P-201ENST00000452083 936 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC093166.2-201ENST00000455969 1017 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 TPT1P1-201ENST00000458495 518 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC023424.1-201ENST00000496058 459 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 BOLA3P3-201ENST00000505182 232 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 RNU6-513P-201ENST00000516104 104 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AP001636.2-201ENST00000525517 696 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 MTCYBP13-201ENST00000578634 1093 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC097478.2-201ENST00000610572 514 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AL359513.1-201ENST00000614364 557 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC132825.7-201ENST00000638744 335 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 AC011755.1-201ENST00000623763 2049 ntBASIC5.51□□□□□ -1.53
USP29Q9HBJ7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 AC097063.1-201ENST00000426714 1797 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 PROS2P-201ENST00000474651 1951 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 RNA5SP234-201ENST00000363916 119 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 AP002530.1-201ENST00000405705 684 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 RNU4-74P-201ENST00000411280 161 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 AC008173.1-201ENST00000418901 264 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 MTCYBP29-201ENST00000436327 1006 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 CYCSP12-201ENST00000437729 300 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 AC245047.2-201ENST00000441060 530 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 Z77249.1-201ENST00000444622 1175 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 AC105399.1-202ENST00000447303 205 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 HMGB1P5-202ENST00000451497 985 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 RANP1-206ENST00000455094 651 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 RPL5P13-201ENST00000462840 709 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 RN7SL329P-201ENST00000467740 299 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 AC091544.1-201ENST00000484702 348 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 RPS21P4-201ENST00000487122 248 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 RN7SL447P-201ENST00000494711 245 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 AC010627.1-201ENST00000503819 1294 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.5□□□□□ -1.53
USP29Q9HBJ7 HIGD1AP14-201ENST00000507617 282 ntBASIC5.5□□□□□ -1.53
USP29Q9HBJ7 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms