Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SSX3Q99909 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 AL031119.1-201ENST00000404707 1879 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX3Q99909 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SSX3Q99909 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX3Q99909 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.48□□□□□ -1.69
SSX3Q99909 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX3Q99909 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 ATP5F1P2-201ENST00000398143 760 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 AC009804.1-201ENST00000400949 179 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SSX3Q99909 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 ARL2BPP3-201ENST00000421226 480 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 AC073508.1-201ENST00000428866 656 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 RPL17P35-201ENST00000432217 549 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 CFL1P1-202ENST00000432948 411 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 PTP4A1P3-201ENST00000433661 420 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX3Q99909 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX3Q99909 GTF3AP5-201ENST00000442645 697 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 AC016772.1-201ENST00000444170 1261 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 SUMO2P1-206ENST00000445436 284 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 AL606490.1-201ENST00000452266 765 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 HMGB3P21-201ENST00000452483 547 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX3Q99909 RPS26P39-201ENST00000469206 341 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 RN7SL583P-201ENST00000475692 287 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 SYT14P1-201ENST00000481459 721 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 EIF1P7-201ENST00000487533 337 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 RPS17P5-201ENST00000498293 408 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.48□□□□□ -1.69
SSX3Q99909 MTND3P24-201ENST00000506306 329 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 VTA1P2-201ENST00000520205 911 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 HAUS1P3-201ENST00000523909 662 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.48□□□□□ -1.69
SSX3Q99909 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX3Q99909 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX3Q99909 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX3Q99909 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX3Q99909 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX3Q99909 H3F3BP2-201ENST00000583907 357 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX3Q99909 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.48□□□□□ -1.69
SSX3Q99909 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX3Q99909 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX3Q99909 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX3Q99909 SUGT1P3-202ENST00000604259 383 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 AC100847.1-201ENST00000611316 481 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 AC025574.2-201ENST00000615621 514 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX3Q99909 AC022106.2-201ENST00000620114 757 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 AC090617.9-201ENST00000623751 147 ntBASIC4.48□□□□□ -1.69
SSX3Q99909 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SSX3Q99909 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX3Q99909 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SSX3Q99909 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.48□□□□□ -1.69
SSX3Q99909 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SSX3Q99909 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX3Q99909 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSX3Q99909 AC074029.4-201ENST00000624796 1859 ntBASIC4.47□□□□□ -1.69
SSX3Q99909 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.47□□□□□ -1.69
SSX3Q99909 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.47□□□□□ -1.69
SSX3Q99909 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSX3Q99909 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSX3Q99909 AC063976.2-201ENST00000425667 3556 ntBASIC4.47□□□□□ -1.69
SSX3Q99909 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SSX3Q99909 CR788268.1-201ENST00000603931 1809 ntBASIC4.47□□□□□ -1.69
SSX3Q99909 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSX3Q99909 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.47□□□□□ -1.69
SSX3Q99909 OR10J6P-201ENST00000289731 930 ntBASIC4.47□□□□□ -1.69
SSX3Q99909 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX3Q99909 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX3Q99909 RNU6-317P-201ENST00000384031 107 ntBASIC4.47□□□□□ -1.69
SSX3Q99909 U3.28-201ENST00000391249 210 ntBASIC4.47□□□□□ -1.69
SSX3Q99909 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSX3Q99909 TAF9BP2-201ENST00000400856 499 ntBASIC4.47□□□□□ -1.69
SSX3Q99909 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX3Q99909 AL355433.1-201ENST00000422804 300 ntBASIC4.47□□□□□ -1.69
SSX3Q99909 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.47□□□□□ -1.69
SSX3Q99909 HSPD1P12-201ENST00000429127 1069 ntBASIC4.47□□□□□ -1.69
SSX3Q99909 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX3Q99909 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.47□□□□□ -1.69
SSX3Q99909 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSX3Q99909 AC110749.1-201ENST00000462007 357 ntBASIC4.47□□□□□ -1.69
SSX3Q99909 RPL7P39-201ENST00000481157 744 ntBASIC4.47□□□□□ -1.69
SSX3Q99909 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.47□□□□□ -1.69
SSX3Q99909 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX3Q99909 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms