Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
COL21A1Q96P44 AC107021.2-201ENST00000567714 2095 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.52□□□□□ -1.69
COL21A1Q96P44 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL21A1Q96P44 MAPK10-263ENST00000641052 4307 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL21A1Q96P44 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL21A1Q96P44 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 SNORA51.8-201ENST00000384234 132 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 HMGB3P7-201ENST00000400214 611 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 AL109941.1-201ENST00000401925 229 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 Y_RNA.625-201ENST00000411256 107 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 AC098592.2-201ENST00000413158 265 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 COX6B1P1-201ENST00000415962 213 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 AC006455.6-201ENST00000426192 893 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 TMX2P1-201ENST00000436507 708 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 AC004938.1-201ENST00000438468 308 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 RPL7P61-201ENST00000451721 751 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL21A1Q96P44 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 AC093270.2-201ENST00000486157 792 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 NDUFA5P12-201ENST00000503796 343 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 GAPDHP56-201ENST00000506031 988 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 BTF3P13-201ENST00000513224 490 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 AC022616.2-201ENST00000523185 300 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 RPL21P7-201ENST00000557463 483 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 AL137246.1-201ENST00000607072 977 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 AC234782.5-201ENST00000617723 324 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 AC015804.1-201ENST00000622935 435 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 CR381572.2-201ENST00000624852 397 ntBASIC4.51□□□□□ -1.69
COL21A1Q96P44 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL21A1Q96P44 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL21A1Q96P44 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.51□□□□□ -1.69
COL21A1Q96P44 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL21A1Q96P44 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL21A1Q96P44 MAPK10-303ENST00000641324 3959 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL21A1Q96P44 RNU6-729P-201ENST00000384399 107 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 SNORD96B-201ENST00000386148 79 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 SNORA79B-201ENST00000410557 148 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC009237.10-201ENST00000414112 510 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC007394.1-201ENST00000421941 531 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC093414.1-201ENST00000434712 514 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 RPL12P3-201ENST00000440080 396 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 AL645937.3-201ENST00000453647 936 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 HIGD1AP8-201ENST00000453927 274 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC005008.1-201ENST00000456151 612 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 RPL23AP56-201ENST00000460778 453 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL21A1Q96P44 RNA5SP360-201ENST00000516555 118 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 AP001922.4-201ENST00000526967 290 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC021006.3-201ENST00000530771 192 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 GCSHP4-201ENST00000538792 439 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 GSTP1P1-201ENST00000548078 319 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 PCNPP1-201ENST00000552501 511 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 AL049839.1-201ENST00000556151 657 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 AP000919.1-201ENST00000582850 985 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC020910.3-201ENST00000603701 874 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC233280.2-201ENST00000603917 1070 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC087283.1-201ENST00000604029 1074 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC005084.1-201ENST00000605160 304 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AL121890.2-201ENST00000617644 465 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AL022401.1-201ENST00000619498 108 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC140113.4-201ENST00000622087 222 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 AC006453.5-201ENST00000636451 619 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 IRF5P1-201ENST00000504852 2164 ntBASIC4.5□□□□□ -1.69
COL21A1Q96P44 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
COL21A1Q96P44 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL21A1Q96P44 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms