Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 MIR6830-201ENST00000636015 70 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AL139254.3-201ENST00000641097 674 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AC015813.6-201ENST00000624409 5808 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 AC022893.2-201ENST00000564832 3296 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 ATP5HP3-201ENST00000396994 486 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 RN7SKP106-201ENST00000410832 272 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 TRIM60P17-201ENST00000415181 719 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 AC004690.1-201ENST00000418216 328 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 NPM1P18-201ENST00000434232 732 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 C1DP3-201ENST00000455013 423 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 RPL31P53-201ENST00000457065 348 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 PPIAP21-201ENST00000464473 501 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 RPL12P20-201ENST00000475538 479 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 AC116562.1-201ENST00000485355 781 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 AC098976.1-201ENST00000513014 541 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 AC012339.2-201ENST00000523996 453 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 MIR3908-201ENST00000579798 126 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 KATNBL1P1-201ENST00000605192 748 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 AC006484.1-201ENST00000435086 1884 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 VPS35P1-201ENST00000563400 1518 ntBASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN4Q96NY8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 RBPJP2-201ENST00000618187 1444 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 RN7SKP145-201ENST00000363291 303 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 MIR129-1-201ENST00000384972 72 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 RN7SKP27-201ENST00000410684 333 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 ELOCP19-201ENST00000411919 318 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC007064.3-201ENST00000422608 359 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 SETP10-201ENST00000424368 814 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 RPL12P28-201ENST00000430852 489 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC073143.1-201ENST00000436316 395 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC004980.3-201ENST00000447046 365 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 GAPDHP14-201ENST00000450472 937 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC091180.1-201ENST00000462104 372 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC117525.1-201ENST00000515228 503 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC020937.1-201ENST00000519677 1013 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC004241.3-201ENST00000611728 517 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC019206.1-201ENST00000621938 425 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 AC138965.3-201ENST00000623875 498 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.16□□□□□ -1.58
NECTIN4Q96NY8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms