Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 AP002371.1-201ENST00000463604 433 ntBASIC4.87□□□□□ -1.63
C9orf72Q96LT7 DEFB109F-201ENST00000491870 277 ntBASIC4.87□□□□□ -1.63
C9orf72Q96LT7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 KATNBL1P4-201ENST00000503545 918 ntBASIC4.87□□□□□ -1.63
C9orf72Q96LT7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.87□□□□□ -1.63
C9orf72Q96LT7 MRPS33P2-201ENST00000507850 322 ntBASIC4.87□□□□□ -1.63
C9orf72Q96LT7 AC002456.2-201ENST00000509356 380 ntBASIC4.87□□□□□ -1.63
C9orf72Q96LT7 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 AC021006.3-201ENST00000530771 192 ntBASIC4.87□□□□□ -1.63
C9orf72Q96LT7 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 AP000919.1-201ENST00000582850 985 ntBASIC4.87□□□□□ -1.63
C9orf72Q96LT7 AL359757.1-201ENST00000623176 255 ntBASIC4.87□□□□□ -1.63
C9orf72Q96LT7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
C9orf72Q96LT7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 RNU6-167P-201ENST00000384292 106 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 MIR195-201ENST00000385194 87 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AL021331.1-201ENST00000402817 582 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AC233289.1-201ENST00000403700 508 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 RPS17P8-201ENST00000434525 335 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AC112498.1-201ENST00000444401 332 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 RN7SL319P-201ENST00000480656 221 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AGGF1P3-201ENST00000493675 1213 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 BTF3P13-201ENST00000513224 490 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AC084759.1-201ENST00000561168 290 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AC009117.1-201ENST00000563948 554 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AC005520.3-201ENST00000602874 370 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AC104785.1-201ENST00000603220 588 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf72Q96LT7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 AP001273.1-201ENST00000624493 3152 ntBASIC4.86□□□□□ -1.63
C9orf72Q96LT7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 MAPK10-303ENST00000641324 3959 ntBASIC4.85□□□□□ -1.63
C9orf72Q96LT7 TLK1P1-201ENST00000456760 2440 ntBASIC4.85□□□□□ -1.63
C9orf72Q96LT7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AC104651.2-201ENST00000447549 528 ntBASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AL591363.1-201ENST00000450091 483 ntBASIC4.85□□□□□ -1.63
C9orf72Q96LT7 RPL23AP56-201ENST00000460778 453 ntBASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AC090142.2-201ENST00000483263 416 ntBASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AC104971.1-201ENST00000495117 578 ntBASIC4.85□□□□□ -1.63
C9orf72Q96LT7 RPS27AP18-201ENST00000515536 459 ntBASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AC015912.2-201ENST00000571053 181 ntBASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AC209154.1-201ENST00000582156 337 ntBASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AL121932.1-201ENST00000605542 214 ntBASIC4.85□□□□□ -1.63
C9orf72Q96LT7 AC067838.1-201ENST00000606064 577 ntBASIC4.85□□□□□ -1.63
C9orf72Q96LT7 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.85□□□□□ -1.63
C9orf72Q96LT7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms