Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MTND4P11-201ENST00000417020 1058 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF4Q92544 AL121882.1-201ENST00000422893 417 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 MTCO2P1-201ENST00000424648 477 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 NIPA2P1-201ENST00000426223 976 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF4Q92544 AL161722.2-201ENST00000434731 981 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 PSMD10P3-201ENST00000437000 448 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 AL645638.1-201ENST00000440519 361 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 AC007000.2-201ENST00000442564 487 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 RPS3AP41-201ENST00000462701 778 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 AC007686.1-201ENST00000488511 463 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 RPS12P31-201ENST00000491419 398 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF4Q92544 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 AC093799.2-201ENST00000610062 578 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 AC244107.2-201ENST00000611773 76 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 AC025016.1-201ENST00000616746 682 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 AC009501.3-201ENST00000605001 1352 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF4Q92544 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF4Q92544 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF4Q92544 INTS6P1-201ENST00000504674 2530 ntBASIC4.85□□□□□ -1.63
TM9SF4Q92544 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
TM9SF4Q92544 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF4Q92544 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF4Q92544 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF4Q92544 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF4Q92544 SMG1P4-204ENST00000523028 4131 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF4Q92544 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF4Q92544 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF4Q92544 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF4Q92544 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 TTC39DP-201ENST00000416781 1688 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 MTND5P23-201ENST00000430812 1655 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF4Q92544 MIR137-201ENST00000385223 102 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 DBIP1-201ENST00000401435 260 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 OR4K12P-201ENST00000406538 961 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 NPM1P40-201ENST00000412758 733 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 SEPT7P8-201ENST00000413308 775 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 RPA2P2-201ENST00000419698 796 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 PTP4A1P1-201ENST00000420539 515 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 PA2G4P6-201ENST00000438325 1197 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 RPS29P10-201ENST00000439197 166 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 RPL31P20-201ENST00000449593 360 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 AC104634.1-201ENST00000452720 462 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 AC239798.3-201ENST00000454459 408 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 AC108161.1-201ENST00000461060 402 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 OR4V1P-201ENST00000525394 1140 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 AC008147.3-201ENST00000548666 354 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 AL390726.5-202ENST00000564800 256 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 MIR4472-2-201ENST00000582069 67 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 FAM25E-202ENST00000608562 189 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 AC016597.2-201ENST00000613256 341 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 AL122125.1-201ENST00000616999 600 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 AC008147.4-201ENST00000617570 1204 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 AC022960.3-201ENST00000619794 441 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 AL138955.1-201ENST00000622881 1040 ntBASIC4.84□□□□□ -1.63
TM9SF4Q92544 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.84□□□□□ -1.63
TM9SF4Q92544 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF4Q92544 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TM9SF4Q92544 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.84□□□□□ -1.64
TM9SF4Q92544 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms