Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AP000859.1-201ENST00000525536 307 ntBASIC5.19□□□□□ -1.58
CCDC112Q8NEF3 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.19□□□□□ -1.58
CCDC112Q8NEF3 OR7E128P-201ENST00000532736 1024 ntBASIC5.19□□□□□ -1.58
CCDC112Q8NEF3 AL049839.1-201ENST00000556151 657 ntBASIC5.19□□□□□ -1.58
CCDC112Q8NEF3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC112Q8NEF3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC112Q8NEF3 MIR3691-201ENST00000578066 90 ntBASIC5.19□□□□□ -1.58
CCDC112Q8NEF3 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC112Q8NEF3 AL049539.1-201ENST00000611964 459 ntBASIC5.19□□□□□ -1.58
CCDC112Q8NEF3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC112Q8NEF3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC112Q8NEF3 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC112Q8NEF3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC112Q8NEF3 TTC39DP-201ENST00000416781 1688 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AC112255.1-201ENST00000624070 2493 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 OR14L1P-202ENST00000641545 3009 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 RNU1-43P-201ENST00000365052 165 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AL050305.1-201ENST00000399993 1230 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AL139128.1-201ENST00000413921 941 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AC011753.3-201ENST00000443436 406 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 PSMC1P13-201ENST00000458195 985 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AC097484.1-201ENST00000471148 389 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 NDUFB5P1-201ENST00000508134 564 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 OR51K1P-201ENST00000510214 950 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 PPBPP1-201ENST00000510807 373 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 IGLV3-26-201ENST00000520756 302 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AC090151.1-201ENST00000520784 730 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 OR5D15P-201ENST00000531671 942 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AL121932.1-201ENST00000605542 214 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AL445222.1-201ENST00000607259 628 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AL356752.1-201ENST00000615844 593 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AC090510.2-201ENST00000617465 629 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AL022401.1-201ENST00000619498 108 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 CDC27P2-201ENST00000425026 1922 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AC068254.2-201ENST00000623938 3577 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 NXF4-202ENST00000416098 1465 ntBASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC112Q8NEF3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 DUTP5-201ENST00000406790 469 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 U3.36-201ENST00000408418 213 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 RN7SKP126-201ENST00000411143 300 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 AL450263.2-201ENST00000439400 589 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 RN7SL808P-201ENST00000496066 299 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 AK4P6-201ENST00000505168 528 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 CDH12P4-201ENST00000517835 295 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 CDH12P3-201ENST00000517935 295 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 CDH12P1-201ENST00000518435 295 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 AC092490.3-201ENST00000545370 572 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 AC008759.1-201ENST00000589783 983 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 AC006116.3-201ENST00000592968 361 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 AP002884.5-201ENST00000595053 1132 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 AC024940.4-201ENST00000605507 246 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 AC099494.2-201ENST00000623371 978 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 AC073342.3-201ENST00000624211 193 ntBASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC112Q8NEF3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 RN7SKP103-201ENST00000363848 320 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 VDAC2P1-201ENST00000399358 958 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 RPL37P18-201ENST00000411602 243 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 AC093162.1-201ENST00000419682 124 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 LINC00993-201ENST00000420453 540 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 RNA5SP446-201ENST00000515955 82 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 AC069240.1-201ENST00000548774 375 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms