Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 RPL17P36-201ENST00000420302 549 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC009480.2-201ENST00000422916 432 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 TXNL1P1-201ENST00000429528 554 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AP000563.1-201ENST00000490865 758 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 RPS12P31-201ENST00000491419 398 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC026979.1-201ENST00000492525 396 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 MTND1P22-201ENST00000510572 951 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC111000.6-201ENST00000514471 709 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 AP003355.1-201ENST00000518956 587 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC134698.5-201ENST00000519444 336 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 HAUS1P3-201ENST00000523909 662 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC023824.3-201ENST00000569003 562 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC027281.1-201ENST00000574178 758 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC090666.1-201ENST00000578241 445 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 MIR3667-201ENST00000581025 74 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC245036.5-201ENST00000596330 847 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC025857.2-201ENST00000602711 238 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 GAS5-AS1-201ENST00000602767 694 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC022022.2-201ENST00000602989 360 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 KATNBL1P5-201ENST00000605015 517 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 AL450336.1-201ENST00000605180 586 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC093388.1-201ENST00000609166 430 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AL390862.1-201ENST00000635467 1469 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 Z98755.1-201ENST00000407015 1384 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 SAMMSON-226ENST00000642089 1582 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE4Q8N205 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 AL138820.1-201ENST00000617901 5305 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE4Q8N205 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE4Q8N205 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE4Q8N205 OR51B3P-201ENST00000412287 913 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 AL592310.1-201ENST00000414330 671 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 MTND4LP17-201ENST00000414607 293 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 RPS27AP6-201ENST00000427962 448 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 AC093414.1-201ENST00000434712 514 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 TPTE2P5-203ENST00000458118 728 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 RPS23P7-201ENST00000466210 444 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE4Q8N205 RPL23AP73-201ENST00000492507 471 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 GAPDHP56-201ENST00000506031 988 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 AC136777.2-201ENST00000522979 358 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 AC074029.2-201ENST00000551045 634 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 NMNAT1P1-201ENST00000554095 876 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 RPL26P30-202ENST00000602923 645 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 Z94722.1-201ENST00000604328 474 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 AC122108.2-201ENST00000611946 526 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 MIR6839-201ENST00000620425 113 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE4Q8N205 AL022323.4-201ENST00000623980 13120 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNE4Q8N205 DNM1P47-203ENST00000571780 12667 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 DDX6P1-205ENST00000441966 1436 ntBASIC6.31□□□□□ -1.4
SYNE4Q8N205 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms